RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 HIVEP2P31629 2446 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 MGAM2Q2M2H8 2515 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 TARSL2A2RTX5 802 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 D6RAR5 112 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 NEDD8-MDP1E9PL57 170 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 KRT86O43790 486 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 RFPL1O75677 317 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 EPHX1P07099 455 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TYRP14679 529 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 HTR1EP28566 365 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 PCSK6P29122 969 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 UGT1A3P35503 534 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 RBMXP38159 391 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 DGKGP49619 791 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 CCR5P51681 352 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 NEK4P51957 841 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 IST1P53990 364 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 YARSP54577 528 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TLE4Q04727 773 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 ZNF234Q14588 700 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 DDR2Q16832 855 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TMEM132AQ24JP5 1023 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TTC31Q49AM3 519 aaPredicted RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 MCMDC2Q4G0Z9 681 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 VWA2Q5GFL6 755 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 ATP1A1-AS1Q5TC04 95 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 NAPEPLDQ6IQ20 393 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 CWC27Q6UX04 472 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TICAM2Q86XR7 235 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 BBS7Q8IWZ6 715 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 CEP120Q8N960 986 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 DNAJB8Q8NHS0 232 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TMEM159Q96B96 161 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 FAM227BQ96M60 508 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 SRRTQ9BXP5 876 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 CNNM2Q9H8M5 875 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 LUZP4Q9P127 313 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 TUBGCP4Q9UGJ1 667 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.93□□□□□ -1.144e-6■■■■□ 23.7
EXOSC3-206ENST00000489414 PTPRJQ12913 1337 aa7.93□□□□□ -1.14
EXOSC3-206ENST00000489414 NEMP2A6NFY4 417 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 PRPF40AO75400 957 aaKnown RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 NEBLO76041 1014 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 DNTTP04053 509 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 YWHABP31946 246 aaKnown RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 DEKP35659 375 aaKnown RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 MEOX1P50221 254 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 MAPK10P53779 464 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 NAPAP54920 295 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 RPS14P62263 151 aaKnown RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 NUCB2P80303 420 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 JMJD6Q6NYC1 403 aaPredicted RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 DSTYKQ6XUX3 929 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 CACNA2D3Q8IZS8 1091 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 CTCFLQ8NI51 663 aaPredicted RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 SNRNP40Q96DI7 357 aaKnown RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 DRC1Q96MC2 740 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 CCDC3Q9BQI4 270 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 INTS2Q9H0H0 1204 aaKnown RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 TTC12Q9H892 705 aaPredicted RBP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 TMLHEQ9NVH6 421 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 KLHL11Q9NVR0 708 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 MARK1Q9P0L2 795 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 PCDHB5Q9Y5E4 795 aa7.92□□□□□ -1.14
EXOSC3-206ENST00000489414 MYO7BQ6PIF6 2116 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 UNC13CQ8NB66 2214 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 SONP18583 2426 aaKnown RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 LRRIQ4A6NIV6 560 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 ACKR2O00590 384 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 MUSKO15146 869 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 LATO43561 262 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 OAS1P00973 400 aaKnown RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 ODC1P11926 461 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 GUCY2CP25092 1073 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 LRPAP1P30533 357 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 DNAJA1P31689 397 aaKnown RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 KRT83P78385 493 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 NR0B2Q15466 257 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 TMEM164Q5U3C3 297 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 ZNF517Q6ZMY9 492 aaPredicted RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 USP30Q70CQ3 517 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 ZNF438Q7Z4V0 828 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 SLFN12Q8IYM2 578 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 RBBP8NLQ8NC74 664 aaPredicted RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 OR2T34Q8NGX1 318 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 ITLN2Q8WWU7 325 aaPredicted RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 NAT6Q93015 286 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 TMEM74Q96NL1 305 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 BBS2Q9BXC9 721 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 CCDC113Q9H0I3 377 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 SLAMF7Q9NQ25 335 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 ASF1BQ9NVP2 202 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 GGT7Q9UJ14 662 aa7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 FBXO10Q9UK96 956 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms