RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PLD5Q8N7P1 536 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 C12orf29Q8N999 325 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC197Q8NCU1 140 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 SMG8Q8ND04 991 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PYROXD1Q8WU10 500 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 LINC01599Q8WXQ3 324 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 MAML1Q92585 1016 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 CABS1Q96KC9 395 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 MAGEB18Q96M61 343 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 UROC1Q96N76 676 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PEBP4Q96S96 227 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 DHRS4Q9BTZ2 278 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 SNRNP25Q9BV90 132 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 MTIF3Q9H2K0 278 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 RASSF4Q9H2L5 321 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 ACSS3Q9H6R3 686 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 LRRC4CQ9HCJ2 640 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PCDH18Q9HCL0 1135 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PNPLA8Q9NP80 782 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 NGRNQ9NPE2 291 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PCSK1NQ9UHG2 260 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 DSEQ9UL01 958 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PADI3Q9ULW8 664 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 NAALADL1Q9UQQ1 740 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 GINS2Q9Y248 185 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 COL4A4P53420 1690 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 RASA4BC9J798 803 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 TRDMT1O14717 391 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 PPP1R12AO14974 1030 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 NCAM2O15394 837 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 RASA4O43374 803 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 MGEA5O60502 916 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 GCATO75600 419 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 STK10O94804 968 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ZWINTO95229 277 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ZBED1O96006 694 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 F9P00740 461 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 THP07101 528 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 GSTA1P08263 222 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 MLNP12872 115 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 TPSB2P20231 275 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 IL4RP24394 825 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 PCSK1P29120 753 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CD52P31358 61 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 STX2P32856 288 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ARL4AP40617 200 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SLCO1A2P46721 670 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 HCAR3P49019 387 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 WDR5P61964 334 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 YWHAZP63104 245 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SARNPP82979 210 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SMAD3P84022 425 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 IL9RQ01113 521 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SLC20A2Q08357 652 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 USP4Q13107 963 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ORC1Q13415 861 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 IKBKEQ14164 716 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 KCNJ11Q14654 390 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 LLGL1Q15334 1064 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 TPSAB1Q15661 275 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 MAPRE1Q15691 268 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 LACTB2Q53H82 288 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 OXLD1Q5BKU9 147 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SLC45A4Q5BKX6 768 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 TTC19Q6DKK2 380 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ZNF449Q6P9G9 518 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 VSTM1Q6UX27 236 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC121Q6ZUS5 278 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 PDZD4Q76G19 769 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 OTOP2Q7RTS6 562 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 FAM228AQ86W67 206 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC13Q8IYE1 715 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ZBED8Q8IZ13 594 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 GLIS1Q8NBF1 620 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 DYDC1Q8WWB3 177 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CKAP2Q8WWK9 683 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 IRGQQ8WZA9 623 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SEPT8Q92599 483 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 TOP1MTQ969P6 601 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 NTAN1Q96AB6 310 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 ZBTB9Q96C00 473 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 PGAP3Q96FM1 320 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SEC16BQ96JE7 1060 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 C9orf72Q96LT7 481 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SMC6Q96SB8 1091 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CYTH2Q99418 400 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 BRD8Q9H0E9 1235 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 NRDE2Q9H7Z3 1164 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 VPS37BQ9H9H4 285 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 USP29Q9HBJ7 922 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 XAB2Q9HCS7 855 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CNGB3Q9NQW8 809 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 EIF2B3Q9NR50 452 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 FAM49BQ9NUQ9 324 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms