RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FBXO28Q9NVF7 368 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 TTBK1Q5TCY1 1321 aaPredicted RBP4.21□□□□□ -1.73
RFC4-213ENST00000489028 TTC34A8MYJ7 566 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 SOCS2O14508 198 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 SLC3A2P08195 630 aaKnown RBP4.21□□□□□ -1.74
RFC4-213ENST00000489028 TECP42680 631 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 MTX1Q13505 466 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 EPHA10Q5JZY3 1008 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 AWAT2Q6E213 333 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 ZNF474Q6S9Z5 364 aaPredicted RBP4.21□□□□□ -1.74
RFC4-213ENST00000489028 ZNF793Q6ZN11 406 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 TECPR1Q7Z6L1 1165 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 MORC1Q86VD1 984 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 ANKRD13BQ86YJ7 626 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 SYTL1Q8IYJ3 562 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 PRPF18Q99633 342 aaKnown RBP4.21□□□□□ -1.74
RFC4-213ENST00000489028 TMEM45AQ9NWC5 275 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 UBE2J1Q9Y385 318 aaPredicted RBP4.21□□□□□ -1.74
RFC4-213ENST00000489028 SPATA31A5Q5VU36 1347 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 SPATA31A7Q8IWB4 1347 aa4.21□□□□□ -1.74
RFC4-213ENST00000489028 A0A0G2JK05 382 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 NKX2-8O15522 239 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 DNPH1O43598 174 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 PPP6R2O75170 966 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 TNFRSF6BO95407 300 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 IFIT2P09913 472 aaKnown RBP4.2□□□□□ -1.74
RFC4-213ENST00000489028 TNFRSF1BP20333 461 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 SLC37A1P57057 533 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 STARD3Q14849 445 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 PGM5Q15124 567 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 AAK1Q2M2I8 961 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 DHRS13Q6UX07 377 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 FAM57BQ71RH2 274 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 MRPL10Q7Z7H8 261 aaKnown RBP4.2□□□□□ -1.74
RFC4-213ENST00000489028 TRABD2AQ86V40 505 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 ARL14EPQ8N8R7 260 aaPredicted RBP4.2□□□□□ -1.74
RFC4-213ENST00000489028 EXD3Q8N9H8 876 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 C9orf106Q8NAJ2 232 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 HMCESQ96FZ2 354 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 VCPIP1Q96JH7 1222 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 ZFYVE19Q96K21 471 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 PIMREGQ9BSJ6 248 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 MECRQ9BV79 373 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 FOXP1Q9H334 677 aaPredicted RBP4.2□□□□□ -1.74
RFC4-213ENST00000489028 OBP2BQ9NPH6 170 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 ZBTB40Q9NUA8 1239 aa4.2□□□□□ -1.74
RFC4-213ENST00000489028 A0A087WV62 115 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 TRBV5-3A0A0A0MS03 114 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 A0A1W2PPC1 479 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 LGALS16A8MUM7 142 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 KIF28PB7ZC32 967 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 BMP15O95972 392 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 WNT1P04628 370 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ENO1P06733 434 aaKnown RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 CD63P08962 238 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 FGF2P09038 288 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 TFEBP19484 476 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 AKT1P31749 480 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ALDH18A1P54886 795 aaKnown RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 FOXL2P58012 376 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 LINC00205P59089 165 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 RPL15P61313 204 aaKnown RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 BTKQ06187 659 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 GALNT1Q10472 559 aaPredicted RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 LAMB3Q13751 1172 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 CBFBQ13951 182 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 SPARCL1Q14515 664 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 BTBD16Q32M84 506 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ZNF260Q3ZCT1 412 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ANKRD40Q6AI12 368 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 RINT1Q6NUQ1 792 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 GGT6Q6P531 493 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 TOGARAM2Q6ZUX3 1019 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 TTC30AQ86WT1 665 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ADGRF3Q8IZF5 1079 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 BCAS4Q8TDM0 211 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ZFPM2Q8WW38 1151 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 MSI2Q96DH6 328 aaKnown RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 ZNF347Q96SE7 839 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 WDR12Q9GZL7 423 aaKnown RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 ZNF700Q9H0M5 742 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 TP63Q9H3D4 680 aaPredicted RBP4.19□□□□□ -1.74
RFC4-213ENST00000489028 ARFGAP3Q9NP61 516 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 RAB21Q9UL25 225 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 EMSYQ7Z589 1322 aa4.19□□□□□ -1.74
RFC4-213ENST00000489028 ABHD14A-ACY1A0A1B0GW23 586 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 FAM90A18PA6NE21 464 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 FAM90A16PA6NEW6 464 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 GOLGA6L3A6NEY3 463 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 FAM90A9PA6NNJ1 464 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 FAM90A5PA8MXJ8 464 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 ZNF814B7Z6K7 855 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 PLIN1O60240 522 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 UGDHO60701 494 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 CNTN5O94779 1100 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 FAM90A15PP0C7V4 464 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 FAM90A14PP0C7W9 464 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 GYS1P13807 737 aa4.18□□□□□ -1.74
RFC4-213ENST00000489028 AKR1A1P14550 325 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms