RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SEMA4BQ9NPR2 832 aaPredicted RBP3.66□□□□□ -1.82
PRPF4-203ENST00000488937 FSCN3Q9NQT6 498 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 PARPBPQ9NWS1 579 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 ADPRHL2Q9NX46 363 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 PPP1R14DQ9NXH3 145 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 POGKQ9P215 609 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 SLCO3A1Q9UIG8 710 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 OAZ3Q9UMX2 235 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 RABL2BQ9UNT1 228 aa3.66□□□□□ -1.82
PRPF4-203ENST00000488937 REXO2Q9Y3B8 237 aaKnown RBP3.66□□□□□ -1.82
PRPF4-203ENST00000488937 A0A1W2PQ09 198 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 A0A1W2PQM1 296 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 GAGE10A6NGK3 116 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 LIPT2A6NK58 231 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 PPP6R2O75170 966 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 COQ9O75208 318 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 GUCY1B2O75343 617 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TULP3O75386 442 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 OR2C1O95371 312 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 SNRNP70P08621 437 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 SBK3P0C264 359 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 GAAP10253 952 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 PTPN2P17706 415 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CDH2P19022 906 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 FPR1P21462 350 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TLX1P31314 330 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 PAFAH1B1P43034 410 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ETV4P43268 484 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 HARS2P49590 506 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 LIMK1P53667 647 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 COL10A1Q03692 680 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 C17orf67Q0P5P2 114 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TCF15Q12870 199 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 AIMP2Q13155 320 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TNFAIP1Q13829 316 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 KCNB1Q14721 858 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 PABPC1LQ4VXU2 614 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ZMAT1Q5H9K5 638 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 RAB41Q5JT25 222 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF484Q5JVG2 852 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 METTL24Q5JXM2 366 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TMEM200BQ69YZ2 307 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 RAB12Q6IQ22 244 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 MTFR2Q6P444 385 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 Q6ZSN1 163 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 SEM1Q6ZVN7 128 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 MICALCLQ6ZW33 695 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF804AQ7Z570 1209 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 GPR149Q86SP6 731 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ARHGEF25Q86VW2 580 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 GAS2L3Q86XJ1 694 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 PDSS2Q86YH6 399 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ADGRF2Q8IZF7 708 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CNTROBQ8N137 903 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 C17orf53Q8N3J3 647 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 MPP5Q8N3R9 675 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 OTUD6BQ8N6M0 293 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 SPC24Q8NBT2 197 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 PIK3C3Q8NEB9 887 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 NCSTNQ92542 709 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TAF4BQ92750 862 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 N4BP2L2Q92802 583 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF622Q969S3 477 aaKnown RBP eCLIP3.65□□□□□ -1.837e-6■■□□□ 12.8
PRPF4-203ENST00000488937 ZNF653Q96CK0 615 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CEP95Q96GE4 821 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 RBM18Q96H35 190 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 DYDC2Q96IM9 177 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CABS1Q96KC9 395 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 LENG8Q96PV6 779 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ATP6V0BQ99437 205 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TTPALQ9BTX7 342 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 SPATA5L1Q9BVQ7 753 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CARD11Q9BXL7 1154 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 FAM83DQ9H4H8 585 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 LDAHQ9H6V9 325 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ADARB2Q9NS39 739 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TMEM140Q9NV12 185 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 TMLHEQ9NVH6 421 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 POLR3BQ9NW08 1133 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 SELENONQ9NZV5 590 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CFAP97Q9P2B7 532 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 UBA2Q9UBT2 640 aaPredicted RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 CNOT7Q9UIV1 285 aaKnown RBP3.65□□□□□ -1.83
PRPF4-203ENST00000488937 ATAD2BQ9ULI0 1458 aa3.65□□□□□ -1.83
PRPF4-203ENST00000488937 COL15A1P39059 1388 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ATRNL1Q5VV63 1379 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 J3KTA2 159 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 DDX39AO00148 427 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 RAB27BO00194 218 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 PSMD14O00487 310 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TNPO2O14787 897 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 PLSCR1O15162 318 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 FOXN1O15353 648 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 CYP27B1O15528 508 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ASAP2O43150 1006 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 HNRNPRO43390 633 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 PRAMEF4O60810 478 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SLC43A1O75387 559 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TAF5LO75529 589 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 RPP40O75818 363 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms