RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TRIM49BA6NDI0 452 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 METTL12A8MUP2 240 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 HLA-EP13747 358 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 DAOAP59103 153 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 LRMPQ12912 555 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 CAMK2GQ13555 558 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-231ENST00000488905 TRIP6Q15654 476 aaKnown RBP19.21■□□□□ 0.67
HDAC6-231ENST00000488905 PKDCCQ504Y2 493 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 FNDC3BQ53EP0 1204 aaKnown RBP19.21■□□□□ 0.67
HDAC6-231ENST00000488905 RAB44Q7Z6P3 723 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-231ENST00000488905 SCML4Q8N228 414 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 CHCHD4Q8N4Q1 142 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 OR2T3Q8NH03 318 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 NUP58Q9BVL2 599 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 TMEM245Q9H330 911 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 GGA2Q9UJY4 613 aa19.21■□□□□ 0.67
HDAC6-231ENST00000488905 SRRM3A6NNA2 597 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-231ENST00000488905 LCP1P13796 627 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 ADGRF1Q5T601 910 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 MSANTD2Q6P1R3 559 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 CHST9Q7L1S5 443 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 AHI1Q8N157 1196 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.2■□□□□ 0.66
HDAC6-231ENST00000488905 SPATA20Q8TB22 786 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 CYB5D2Q8WUJ1 264 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 PCED1AQ9H1Q7 454 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 LHX5Q9H2C1 402 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 ABCB8Q9NUT2 735 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 PCDHB9Q9Y5E1 797 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 PLXNA2O75051 1894 aa19.2■□□□□ 0.66
HDAC6-231ENST00000488905 ITPR1Q14643 2758 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 LOC400499M0QZD8 3231 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 FAM221BA6H8Z2 402 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 BCAT2O15382 392 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-231ENST00000488905 SMC2O95347 1197 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 CER1O95813 267 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 PAEPP09466 180 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 FMO5P49326 533 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 SGSHP51688 502 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 TMEM270Q6UE05 265 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 LCLAT1Q6UWP7 414 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 ADIPOR2Q86V24 386 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 FAM124AQ86V42 546 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 ZNF366Q8N895 744 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 TFAP2BQ92481 460 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 ERCC4Q92889 916 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-231ENST00000488905 SMARCE1Q969G3 411 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 TMA16Q96EY4 203 aaKnown RBP19.19■□□□□ 0.66
HDAC6-231ENST00000488905 EIF2B4Q9UI10 523 aaKnown RBP19.19■□□□□ 0.66
HDAC6-231ENST00000488905 KIAA1257Q9ULG3 409 aa19.19■□□□□ 0.66
HDAC6-231ENST00000488905 ACACAQ13085 2346 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 IGLV3-27P01718 113 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 FTH1P19P0C7X4 201 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 ZNF883P0CG24 379 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 C7P10643 843 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 PABPC1P11940 636 aaKnown RBP19.18■□□□□ 0.66
HDAC6-231ENST00000488905 RGS7P49802 495 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 PMF1Q6P1K2 205 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 KIAA0907Q7Z7F0 614 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-231ENST00000488905 C1orf216Q8TAB5 229 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 WFDC5Q8TCV5 224 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 IRGQQ8WZA9 623 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 SNX19Q92543 992 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 NT5C1BQ96P26 610 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 GTPBP4Q9BZE4 634 aaKnown RBP19.18■□□□□ 0.66
HDAC6-231ENST00000488905 GAREM1Q9H706 876 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 FBRSQ9HAH7 460 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 IL21RQ9HBE5 538 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 METTL14Q9HCE5 456 aaKnown RBP19.18■□□□□ 0.66
HDAC6-231ENST00000488905 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.18■□□□□ 0.66
HDAC6-231ENST00000488905 PLA2G4CQ9UP65 541 aa19.18■□□□□ 0.66
HDAC6-231ENST00000488905 FNDC3AQ9Y2H6 1198 aaKnown RBP19.18■□□□□ 0.66
HDAC6-231ENST00000488905 M0QYV0 167 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 CBFA2T3O75081 653 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 MATKP42679 507 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 BNC1Q01954 994 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 PTPRNQ16849 979 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 FAM133BQ5BKY9 247 aaKnown RBP19.17■□□□□ 0.66
HDAC6-231ENST00000488905 MPP7Q5T2T1 576 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 NUGGCQ68CJ6 796 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 MBLAC2Q68D91 279 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 RFWD3Q6PCD5 774 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 IL27RAQ6UWB1 636 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 ENGASEQ8NFI3 743 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 SLC35F5Q8WV83 523 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 ADAMTS14Q8WXS8 1223 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 C6orf106Q9H6K1 298 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-231ENST00000488905 PCOLCE2Q9UKZ9 415 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 PCDHB4Q9Y5E5 795 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 ATRXP46100 2492 aa19.17■□□□□ 0.66
HDAC6-231ENST00000488905 GOLGA6L4A6NEF3 574 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 PIK3R2O00459 728 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 PSMA7O14818 248 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 PMM2O15305 246 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 IRAK2O43187 625 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 TBL1XO60907 577 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 GABBR2O75899 941 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 LTFP02788 710 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 DLDP09622 509 aaKnown RBP19.16■□□□□ 0.66
HDAC6-231ENST00000488905 ACSL1P33121 698 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms