RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.08■■□□□ 1.93
RNF220-216ENST00000488865 PLA2G4CQ9UP65 541 aa27.08■■□□□ 1.93
RNF220-216ENST00000488865 NEUROG3Q9Y4Z2 214 aa27.08■■□□□ 1.93
RNF220-216ENST00000488865 H0Y626 953 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 P4HA2O15460 535 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 MSI1O43347 362 aaKnown RBP27.07■■□□□ 1.92
RNF220-216ENST00000488865 GABBR2O75899 941 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 TRIM16O95361 564 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 GRIK2Q13002 908 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 CCDC40Q4G0X9 1142 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 MPP7Q5T2T1 576 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 FOXR2Q6PJQ5 311 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 UNC45BQ8IWX7 931 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 PPM1KQ8N3J5 372 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 OR2T3Q8NH03 318 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 LMO3Q8TAP4 145 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 GATA6Q92908 595 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 HSFY1Q96LI6 401 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 PCED1AQ9H1Q7 454 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 TMEM245Q9H330 911 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 MAN1B1Q9UKM7 699 aa27.07■■□□□ 1.92
RNF220-216ENST00000488865 METTL12A8MUP2 240 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 RNF225M0QZC1 329 aaPredicted RBP27.06■■□□□ 1.92
RNF220-216ENST00000488865 IGLV3-27P01718 113 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 CD44P16070 742 aaKnown RBP27.06■■□□□ 1.92
RNF220-216ENST00000488865 RGS7P49802 495 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 RING1Q06587 406 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 DCAF12L1Q5VU92 463 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 NUGGCQ68CJ6 796 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 CHST9Q7L1S5 443 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 ADIPOR2Q86V24 386 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 AHI1Q8N157 1196 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 ZSWIM1Q9BR11 485 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 ABCB8Q9NUT2 735 aa27.06■■□□□ 1.92
RNF220-216ENST00000488865 CHD6Q8TD26 2715 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 M0QYV0 167 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 HYAL3O43820 417 aaPredicted RBP27.05■■□□□ 1.92
RNF220-216ENST00000488865 PABPC1P11940 636 aaKnown RBP27.05■■□□□ 1.92
RNF220-216ENST00000488865 BECN1Q14457 450 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 FNDC3BQ53EP0 1204 aaKnown RBP27.05■■□□□ 1.92
RNF220-216ENST00000488865 ISM2Q6H9L7 571 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 TTI2Q6NXR4 508 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 ZNF557Q8N988 423 aaPredicted RBP27.05■■□□□ 1.92
RNF220-216ENST00000488865 GOLGA1Q92805 767 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 AZIN2Q96A70 460 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 FBRSQ9HAH7 460 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 GGA2Q9UJY4 613 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 ZMIZ1Q9ULJ6 1067 aa27.05■■□□□ 1.92
RNF220-216ENST00000488865 IRAK2O43187 625 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 FBXO21O94952 628 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 LTFP02788 710 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 HLA-EP13747 358 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 BRD2P25440 801 aaKnown RBP27.04■■□□□ 1.92
RNF220-216ENST00000488865 SLC11A2P49281 568 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 FAM193AP78312 1265 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 GCNT1Q02742 428 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 ZNF423Q2M1K9 1284 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 PIK3R6Q5UE93 754 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 ZCCHC9Q8N567 271 aaKnown RBP27.04■■□□□ 1.92
RNF220-216ENST00000488865 CYB5D2Q8WUJ1 264 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 KAT5Q92993 513 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 MIR1-1HGQ9H1L0 117 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 LHX5Q9H2C1 402 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 MSRB2Q9Y3D2 182 aa27.04■■□□□ 1.92
RNF220-216ENST00000488865 AKAP13Q12802 2813 aa27.03■■□□□ 1.92
RNF220-216ENST00000488865 BICDL2A1A5D9 508 aa27.03■■□□□ 1.92
RNF220-216ENST00000488865 MUC22E2RYF6 1773 aaPredicted RBP27.03■■□□□ 1.92
RNF220-216ENST00000488865 BCAT2O15382 392 aaPredicted RBP27.03■■□□□ 1.92
RNF220-216ENST00000488865 ZZEF1O43149 2961 aa27.03■■□□□ 1.92
RNF220-216ENST00000488865 SH3BP5O60239 455 aa27.03■■□□□ 1.92
RNF220-216ENST00000488865 ATP5BP06576 529 aaKnown RBP27.03■■□□□ 1.92
RNF220-216ENST00000488865 SGSHP51688 502 aa27.03■■□□□ 1.92
RNF220-216ENST00000488865 PTPRNQ16849 979 aa27.03■■□□□ 1.92
RNF220-216ENST00000488865 PIK3R2O00459 728 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 ACSL4O60488 711 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 DLDP09622 509 aaKnown RBP27.02■■□□□ 1.92
RNF220-216ENST00000488865 TBX4P57082 545 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 TRIP6Q15654 476 aaKnown RBP27.02■■□□□ 1.92
RNF220-216ENST00000488865 FAM133BQ5BKY9 247 aaKnown RBP27.02■■□□□ 1.92
RNF220-216ENST00000488865 MBLAC2Q68D91 279 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 KLHL10Q6JEL2 608 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 RRAGAQ7L523 313 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 CACUL1Q86Y37 369 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 EHBP1Q8NDI1 1231 aa27.02■■□□□ 1.92
RNF220-216ENST00000488865 FAM221BA6H8Z2 402 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 PPP1R3GB7ZBB8 358 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 TBL1XO60907 577 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 SLC6A4P31645 630 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 ZBTB16Q05516 673 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 RFWD3Q6PCD5 774 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 IL27RAQ6UWB1 636 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 NAXDQ8IW45 347 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 C1orf216Q8TAB5 229 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 WFDC5Q8TCV5 224 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 CLEC4CQ8WTT0 213 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 NELFBQ8WX92 580 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 CAMK1GQ96NX5 476 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 DDX50Q9BQ39 737 aaKnown RBP27.01■■□□□ 1.91
RNF220-216ENST00000488865 SUN2Q9UH99 717 aa27.01■■□□□ 1.91
RNF220-216ENST00000488865 EIF2B4Q9UI10 523 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms