RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 RAB20Q9NX57 234 aa19.89■□□□□ 0.77
GGPS1-206ENST00000488594 ANKRD6Q9Y2G4 727 aa19.89■□□□□ 0.77
GGPS1-206ENST00000488594 SNX11Q9Y5W9 270 aa19.89■□□□□ 0.77
GGPS1-206ENST00000488594 A0A1B0GVL5 298 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 XPO1O14980 1071 aaKnown RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 PCDHGA12O60330 932 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 DNTTP04053 509 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 ATP5BP06576 529 aaKnown RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 CD27P26842 260 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 MXI1P50539 228 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 CCT8P50990 548 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 BCAT1P54687 386 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 INAVAQ3KP66 663 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 TTC31Q49AM3 519 aaPredicted RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 SOWAHCQ53LP3 525 aaPredicted RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 ADGRF1Q5T601 910 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 CHST9Q7L1S5 443 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 SEMA4DQ92854 862 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 IPO9Q96P70 1041 aaKnown RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 IRX2Q9BZI1 471 aaPredicted RBP19.88■□□□□ 0.77
GGPS1-206ENST00000488594 LRRC4Q9HBW1 653 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 SGK2Q9HBY8 427 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 TM9SF3Q9HD45 589 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 HPSEQ9Y251 543 aa19.88■□□□□ 0.77
GGPS1-206ENST00000488594 ACACAQ13085 2346 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 DFNA5O60443 496 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 DLDP09622 509 aaKnown RBP19.87■□□□□ 0.77
GGPS1-206ENST00000488594 MPP7Q5T2T1 576 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 BHLHA9Q7RTU4 235 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 KIAA0907Q7Z7F0 614 aaPredicted RBP19.87■□□□□ 0.77
GGPS1-206ENST00000488594 ADIPOR2Q86V24 386 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 ZNF557Q8N988 423 aaPredicted RBP19.87■□□□□ 0.77
GGPS1-206ENST00000488594 CYB5D2Q8WUJ1 264 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 HNRNPLLQ8WVV9 542 aaKnown RBP19.87■□□□□ 0.77
GGPS1-206ENST00000488594 BIRC7Q96CA5 298 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 ABCB8Q9NUT2 735 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 GGA2Q9UJY4 613 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.87■□□□□ 0.77
GGPS1-206ENST00000488594 MAPK8IP1Q9UQF2 711 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 BTBD3Q9Y2F9 522 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 PLXNB3Q9ULL4 1909 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 ITPR1Q14643 2758 aa19.87■□□□□ 0.77
GGPS1-206ENST00000488594 TSPAN3O60637 253 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 APC2O95996 2303 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 PABPC1P11940 636 aaKnown RBP19.86■□□□□ 0.77
GGPS1-206ENST00000488594 SYKP43405 635 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 RPS14P62263 151 aaKnown RBP19.86■□□□□ 0.77
GGPS1-206ENST00000488594 PTPRNQ16849 979 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 GOLGA7BQ2TAP0 167 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 EDRF1Q3B7T1 1238 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 BSPRYQ5W0U4 402 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 PRSS16Q9NQE7 514 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 HESX1Q9UBX0 185 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 SUN2Q9UH99 717 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 SLCO1B1Q9Y6L6 691 aa19.86■□□□□ 0.77
GGPS1-206ENST00000488594 GOLGA8CPA6NN73 597 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 FSBPO95073 299 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 BST2Q10589 180 aaKnown RBP19.85■□□□□ 0.77
GGPS1-206ENST00000488594 DPYDQ12882 1025 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 SMAD1Q15797 465 aaKnown RBP19.85■□□□□ 0.77
GGPS1-206ENST00000488594 ZCWPW2Q504Y3 356 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 MBLAC2Q68D91 279 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 ZNF776Q68DI1 518 aaPredicted RBP19.85■□□□□ 0.77
GGPS1-206ENST00000488594 SIX6OS1Q8N1H7 587 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 ABCC13Q9NSE7 274 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 SFMBT1Q9UHJ3 866 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 TSPAN16Q9UKR8 245 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 SCML1Q9UN30 329 aa19.85■□□□□ 0.77
GGPS1-206ENST00000488594 TRABD2BA6NFA1 517 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 E9PAM4 449 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 PAPSS1O43252 624 aaPredicted RBP19.84■□□□□ 0.77
GGPS1-206ENST00000488594 ADIGQ0VDE8 80 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 SGO2Q562F6 1265 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 USP30Q70CQ3 517 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 ADAT2Q7Z6V5 191 aaKnown RBP19.84■□□□□ 0.77
GGPS1-206ENST00000488594 SCML4Q8N228 414 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 ZNF366Q8N895 744 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 PDCD7Q8N8D1 485 aaKnown RBP19.84■□□□□ 0.77
GGPS1-206ENST00000488594 KCTD13Q8WZ19 329 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 NDRG1Q92597 394 aaKnown RBP19.84■□□□□ 0.77
GGPS1-206ENST00000488594 EDEM1Q92611 657 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 CNGB3Q9NQW8 809 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 NCKAP1Q9Y2A7 1128 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 PTPRBP23467 1997 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 NBEAQ8NFP9 2946 aa19.84■□□□□ 0.77
GGPS1-206ENST00000488594 YJEFN3A6XGL0 299 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 E7ENQ6 273 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 TULP2O00295 520 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 IRAK2O43187 625 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 PRR29P0C7W0 189 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 SETSIPP0DME0 302 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 EPB41P11171 864 aaKnown RBP19.83■□□□□ 0.77
GGPS1-206ENST00000488594 POLR2EP19388 210 aaKnown RBP19.83■□□□□ 0.77
GGPS1-206ENST00000488594 CTSKP43235 329 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 SLC11A2P49281 568 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 YWHAEP62258 255 aaKnown RBP19.83■□□□□ 0.77
GGPS1-206ENST00000488594 RACK1P63244 317 aaKnown RBP19.83■□□□□ 0.77
GGPS1-206ENST00000488594 CYP4F3Q08477 520 aa19.83■□□□□ 0.77
GGPS1-206ENST00000488594 SFSWAPQ12872 951 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms