RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 NDUFS2O75306 463 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PTP4A3O75365 173 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 POP4O95707 220 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 CYP3A7P24462 503 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SLCO1A2P46721 670 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 ALDH7A1P49419 539 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 MAP3K7CLP57077 242 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 CENPCQ03188 943 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 EHHADHQ08426 723 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MFSD13AQ14CX5 517 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 ZNF124Q15973 351 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 CYP20A1Q6UW02 462 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 TMC5Q6UXY8 1006 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 TRMT10CQ7L0Y3 403 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 SV2BQ7L1I2 683 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SETD3Q86TU7 594 aaPredicted RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 TTC7BQ86TV6 843 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 TTC13Q8NBP0 860 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 HM13Q8TCT9 377 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 GRIN3AQ8TCU5 1115 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 LPPQ93052 612 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 CSRNP1Q96S65 589 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 TSEN34Q9BSV6 310 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 CCDC113Q9H0I3 377 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PLEKHA5Q9HAU0 1116 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SPON1Q9HCB6 807 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MCM9Q9NXL9 1143 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 EIF3KQ9UBQ5 218 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 CNOT11Q9UKZ1 510 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 HCN4Q9Y3Q4 1203 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SNX8Q9Y5X2 465 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PLCH1Q4KWH8 1693 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 LMO7Q8WWI1 1683 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PDHXO00330 501 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PDPK1O15530 556 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 H6PDO95479 791 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 CDH1P12830 882 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 GRIK1P39086 918 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 GYG1P46976 350 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 NAPAP54920 295 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 DYNLL1P63167 89 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 IL9RQ01113 521 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 ITGADQ13349 1161 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PFKFB3Q16875 520 aaPredicted RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 TBRG1Q3YBR2 411 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 Q3ZCU0 254 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 BRDTQ58F21 947 aaPredicted RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 SNAP47Q5SQN1 464 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 UGT3A1Q6NUS8 523 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PLEKHG7Q6ZR37 379 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 AKAP14Q86UN6 197 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SRRM1Q8IYB3 904 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 FAM149B1Q96BN6 582 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MTBPQ96DY7 904 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 TTC25Q96NG3 672 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 CPNE5Q9HCH3 593 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MAGEE1Q9HCI5 957 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 ENPP5Q9UJA9 477 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 CPSF3Q9UKF6 684 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 VPS4AQ9UN37 437 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MRPL11Q9Y3B7 192 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 LAMB2P55268 1798 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SF3B1O75533 1304 aaKnown RBP eCLIP6.53□□□□□ -1.36
SIK3-212ENST00000488337 SPATA31A3Q5VYP0 1347 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 NKRFO15226 690 aaKnown RBP eCLIP6.53□□□□□ -1.36
SIK3-212ENST00000488337 ECDO95905 644 aaPredicted RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 GRK2P25098 689 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 OLR1P78380 273 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 FOXK2Q01167 660 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 FUT11Q495W5 492 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MTERF2Q49AM1 385 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 HSF5Q4G112 596 aaPredicted RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 AARS2Q5JTZ9 985 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 C10orf62Q5T681 223 aaPredicted RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 TPH2Q8IWU9 490 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 EID3Q8N140 333 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 ZNF680Q8NEM1 530 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 RFWD2Q8NHY2 731 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 CELF1Q92879 486 aaKnown RBP6.53□□□□□ -1.36
SIK3-212ENST00000488337 CLPTM1LQ96KA5 538 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 AK8Q96MA6 479 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 ZHX3Q9H4I2 956 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 ERVMER34-1Q9H9K5 563 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 SP110Q9HB58 689 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 VAT1LQ9HCJ6 419 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 DIABLOQ9NR28 239 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 PARVAQ9NVD7 372 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 DAPK2Q9UIK4 370 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.53□□□□□ -1.36
SIK3-212ENST00000488337 NIP7Q9Y221 180 aaKnown RBP eCLIP6.53□□□□□ -1.36
SIK3-212ENST00000488337 UGT2A1Q9Y4X1 527 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 LRP6O75581 1613 aa6.53□□□□□ -1.36
SIK3-212ENST00000488337 MYH9P35579 1960 aaKnown RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 C1orf232A0A0U1RR37 186 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms