RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RNF26Q9BY78 433 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 NUAK2Q9H093 628 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 VPS16Q9H269 839 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TAF1DQ9H5J8 278 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 CDCP1Q9H5V8 836 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 SEPSECSQ9HD40 501 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 KCNK9Q9NPC2 374 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 LIN7CQ9NUP9 197 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 ASNSD1Q9NWL6 643 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 GAR1Q9NY12 217 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 PTGFRNQ9P2B2 879 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TRPC5Q9UL62 973 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC12A4Q9UP95 1085 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 LOC105369274A0A096LPK9 316 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 LOC102723532A0A0G2JNH3 316 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC38A8A6NNN8 435 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 ATF7P17544 494 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 NDUFS1P28331 727 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 GRK5P34947 590 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 AGTR2P50052 363 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 PNLIPRP1P54315 467 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 NANOS3P60323 173 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 IRX6P78412 446 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 NHLH1Q02575 133 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 GAB1Q13480 694 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 TMEM95Q3KNT9 176 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 TRIM60Q495X7 471 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 KYAT3Q6YP21 454 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF782Q6ZMW2 699 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 PRIMA1Q86XR5 153 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 TICAM2Q86XR7 235 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF354CQ86Y25 554 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 OR4N4Q8N0Y3 316 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 C5orf34Q96MH7 638 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 EFHD1Q9BUP0 239 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 TRIM2Q9C040 744 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 SAYSD1Q9NPB0 183 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 ZBTB1Q9Y2K1 713 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 SPATA31A1Q5TZJ5 1347 aa4.37□□□□□ -1.71
ECHDC1-217ENST00000488087 NPHP1O15259 732 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 IRAK2O43187 625 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 ALDOAP04075 364 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 TACR3P29371 465 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 SERPINA4P29622 427 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 STAT6P42226 847 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 TAS2R50P59544 299 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 RPL15P61313 204 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 RBM6P78332 1123 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF268Q14587 947 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 TAF5Q15542 800 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 TTC22Q5TAA0 569 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 ANKRD45Q5TZF3 282 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 MIS18BP1Q6P0N0 1132 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 RINLQ6ZS11 566 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 SRFBP1Q8NEF9 429 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 GOLGA1Q92805 767 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D20Q96BZ9 403 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF764Q96H86 408 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 PKNOX2Q96KN3 472 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 SENP7Q9BQF6 1050 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 NDUFAF4Q9P032 175 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 KIF17Q9P2E2 1029 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 SRP68Q9UHB9 627 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 BAG5Q9UL15 447 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 PCDHGB3Q9Y5G1 929 aa4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 SIRT4Q9Y6E7 314 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-217ENST00000488087 C3orf70A6NLC5 250 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 H0Y3Z8 333 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 PRYO14603 147 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 KRT38O76015 456 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 DHRS4L1P0CG22 281 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 HSD3B1P14060 373 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 CST5P28325 142 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 CD38P28907 300 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 MPGP29372 298 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 HOXD12P35452 270 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 DEKP35659 375 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 PRKAA2P54646 552 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM3BP58499 235 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 TLE3Q04726 772 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 BIRC3Q13489 604 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 CUL4BQ13620 913 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 ADCK5Q3MIX3 580 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 TBRG1Q3YBR2 411 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 GALNTL6Q49A17 601 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 GLE1Q53GS7 698 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 LDHAL6AQ6ZMR3 332 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 C8orf58Q8NAV2 365 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 OR6Y1Q8NGX8 325 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 CSGALNACT1Q8TDX6 532 aa4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 PNISRQ8TF01 805 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-217ENST00000488087 ASB12Q8WXK4 309 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms