RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 NELL1Q92832 810 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 FAM149B1Q96BN6 582 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 HHIPQ96QV1 700 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CDK5RAP1Q96SZ6 601 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 BPIFA3Q9BQP9 254 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 IER2Q9BTL4 223 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 BBS2Q9BXC9 721 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 STK33Q9BYT3 514 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 ARHGEF4Q9NR80 690 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 ABCC13Q9NSE7 274 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 OLA1Q9NTK5 396 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 NOCTQ9UK39 431 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 HCN2Q9UL51 889 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 STRIP2Q9ULQ0 834 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CLEC4EQ9ULY5 219 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 RALGAPA1Q6GYQ0 2036 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CEP250Q9BV73 2442 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CKAP5Q14008 2032 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 GOLGA6L7A0A1B0GV03 622 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 PRR23AA6NEV1 266 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 LRRC10BA6NIK2 292 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 TEX33O43247 280 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 GRAP2O75791 330 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 PAPSS2O95340 614 aaPredicted RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 MMEP08473 750 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 NCAM1P13591 858 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 CHRNB2P17787 502 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 CDK11BP21127 795 aaKnown RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 SLC6A4P31645 630 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 KRT9P35527 623 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 EIF2DP41214 584 aaKnown RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 KIR2DL1P43626 348 aaPredicted RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ACADSBP45954 432 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 FNTBP49356 437 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 COG7P83436 770 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 UBXN1Q04323 297 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ZNF528Q3MIS6 628 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ZSCAN23Q3MJ62 389 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 NADSYN1Q6IA69 706 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 RFWD3Q6PCD5 774 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 OLFML1Q6UWY5 402 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 FAM183BPQ6ZVS7 135 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 Q6ZVU0 165 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 LUZP1Q86V48 1076 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 FAM217AQ8IXS0 508 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 SYNPOQ8N3V7 929 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ALLCQ8N6M5 410 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ZBTB44Q8NCP5 570 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 USP33Q8TEY7 942 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 PLD4Q96BZ4 506 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ERLEC1Q96DZ1 483 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 MYEOVQ96EZ4 313 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 PPP1R13BQ96KQ4 1090 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 FCRL2Q96LA5 508 aaPredicted RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ERGIC2Q96RQ1 377 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 PNKPQ96T60 521 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 NAT10Q9H0A0 1025 aaKnown RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 IRF2BPLQ9H1B7 796 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 LHX5Q9H2C1 402 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 CBX8Q9HC52 389 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 DNAJC17Q9NVM6 304 aaKnown RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 ZSCAN32Q9NX65 697 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 MARK1Q9P0L2 795 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 XPO7Q9UIA9 1087 aaKnown RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 HBS1LQ9Y450 684 aaKnown RBP7.46□□□□□ -1.22
UBE4B-209ENST00000487244 GON4LQ3T8J9 2241 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 LAMA1P25391 3075 aa7.46□□□□□ -1.22
UBE4B-209ENST00000487244 NYNRINQ9P2P1 1898 aaKnown RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 CEP192Q8TEP8 1941 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 PLXND1Q9Y4D7 1925 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 PRRT4C9JH25 899 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 SGK1O00141 431 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 GFRA2O00451 464 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 TSPAN3O60637 253 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 LILRB5O75023 590 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 ADAM23O75077 832 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 KLF8O95600 359 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 PENKP01210 267 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 IGLV3-25P01717 112 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 APODP05090 189 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 TPM2P07951 284 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 CISD3P0C7P0 127 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 TFE3P19532 575 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 HOXD9P28356 352 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 CDH5P33151 784 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 SOX5P35711 763 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 GRIA2P42262 883 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 TBX4P57082 545 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 YWHAZP63104 245 aaKnown RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 NOMO3P69849 1222 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 FMO1Q01740 532 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 ARID5AQ03989 594 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 DMC1Q14565 340 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 LPAL2Q16609 132 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 FBXO43Q4G163 708 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 FAM133BQ5BKY9 247 aaKnown RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 C10orf76Q5T2E6 689 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 OTUD1Q5VV17 481 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 FYB2Q5VWT5 728 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms