RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 PRMT1Q99873 361 aaKnown RBP23.28■■□□□ 1.32
RHBDF1-210ENST00000487201 TMPRSS4Q9NRS4 437 aa23.28■■□□□ 1.32
RHBDF1-210ENST00000487201 NDRG2Q9UN36 371 aaKnown RBP23.28■■□□□ 1.32
RHBDF1-210ENST00000487201 ANKRD62A6NC57 917 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 CCP110O43303 1012 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 CACNG3O60359 315 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 CYP1A2P05177 515 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 UBXN2BQ14CS0 331 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 TMEM31Q5JXX7 168 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 STRADAQ7RTN6 431 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 FAM131BQ86XD5 332 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 TMEM139Q8IV31 216 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 PHTF2Q8N3S3 785 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 FBXL6Q8N531 539 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 NAT16Q8N8M0 369 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 FAM172AQ8WUF8 416 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 EZH1Q92800 747 aaPredicted RBP23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 RNF34Q969K3 372 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 PRICKLE1Q96MT3 831 aaPredicted RBP23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 TKTL2Q9H0I9 626 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 WDCPQ9H6R7 721 aa23.27■■□□□ 1.32
RHBDF1-210ENST00000487201 FAM170BA6NMN3 283 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 TSPAN3O60637 253 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 PAGE1O75459 146 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 AOC1P19801 751 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 AMPD2Q01433 879 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 MS4A13Q5J8X5 152 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 BRMS1LQ5PSV4 323 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 FSTL4Q6MZW2 842 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 P2RY13Q9BPV8 354 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 CNPY3Q9BT09 278 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 CLEC4EQ9ULY5 219 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 SCINQ9Y6U3 715 aa23.26■■□□□ 1.31
RHBDF1-210ENST00000487201 MYO18AQ92614 2054 aaKnown RBP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 SOWAHDA6NJG2 315 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 STK25O00506 426 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 TRIM24O15164 1050 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 TULP3O75386 442 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 HOXD9P28356 352 aaPredicted RBP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 CLCN5P51795 746 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 CCINQ13939 588 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 ARTNQ5T4W7 220 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 RAP1GAP2Q684P5 730 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 RNF43Q68DV7 783 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 ASTLQ6HA08 431 aaPredicted RBP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 SFTPA1Q8IWL2 248 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 ARFGAP1Q8N6T3 406 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 ATP6V0D2Q8N8Y2 350 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 CD101Q93033 1021 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 LRFN3Q9BTN0 628 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 OSBPL6Q9BZF3 934 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 DLGAP2Q9P1A6 1054 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 SIT1Q9Y3P8 196 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 LCA5LO95447 670 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 CHRNB1P11230 501 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 EIF2DP41214 584 aaKnown RBP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 SND1Q7KZF4 910 aaKnown RBP eCLIP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 TMEM105Q8N8V8 129 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 FNIP1Q8TF40 1166 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 DDI1Q8WTU0 396 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 MRPL47Q9HD33 250 aaKnown RBP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 FBXO10Q9UK96 956 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 MRPS17Q9Y2R5 130 aaKnown RBP23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 HS3ST4Q9Y661 456 aa23.25■■□□□ 1.31
RHBDF1-210ENST00000487201 DOCK4Q8N1I0 1966 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 DCNP07585 359 aaKnown RBP23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 GGCXP38435 758 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 RPS24P62847 133 aaKnown RBP23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 CLDN23Q96B33 292 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 TMA16Q96EY4 203 aaKnown RBP23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 NELL2Q99435 816 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 NUP85Q9BW27 656 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 RBM12Q9NTZ6 932 aaKnown RBP23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 TMEM51Q9NW97 253 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 SLC12A6Q9UHW9 1150 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 CACNA1IQ9P0X4 2223 aa23.24■■□□□ 1.31
RHBDF1-210ENST00000487201 ANTXRLA6NF34 631 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 EGFP01133 1207 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 TACR2P21452 398 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 MPPE1Q53F39 396 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 CCDC170Q8IYT3 715 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 CCDC185Q8N715 623 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 SNX10Q9Y5X0 201 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 VPS13AQ96RL7 3174 aa23.23■■□□□ 1.31
RHBDF1-210ENST00000487201 H2AFZP0C0S5 128 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 CISD3P0C7P0 127 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 TMEM253P0C7T8 217 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 PSMA2P25787 234 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 H2AFVQ71UI9 128 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 C14orf80Q86SX3 495 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 CHSY1Q86X52 802 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 TMTC1Q8IUR5 882 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 ZNF683Q8IZ20 524 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 IRX2Q9BZI1 471 aaPredicted RBP23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 DNAJC17Q9NVM6 304 aaKnown RBP23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 PAXBP1Q9Y5B6 917 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 A0A0A0MRY4 1105 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 CYBBP04839 570 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 KDSRQ06136 332 aa23.22■■□□□ 1.31
RHBDF1-210ENST00000487201 GRSF1Q12849 480 aaKnown RBP eCLIP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms