RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 GUCY2CP25092 1073 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 CCR5P51681 352 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 AAMPQ13685 434 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 EIF4HQ15056 248 aaKnown RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 CDKN3Q16667 212 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 USP30Q70CQ3 517 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 MAMDC2Q7Z304 686 aaPredicted RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 MOCOSQ96EN8 888 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 OMDQ99983 421 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 TIPINQ9BVW5 301 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 ZNF518BQ9C0D4 1074 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 AGO2Q9UKV8 859 aaKnown RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 MDM4O15151 490 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 VPS4BO75351 444 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 PIGRP01833 764 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 GIMD1P0DJR0 217 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 ALPPL2P10696 532 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 LIPCP11150 499 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 RARGP13631 454 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 ATP5C1P36542 298 aaKnown RBP12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 WNT7BP56706 349 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 EHHADHQ08426 723 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 POM121L1PQ3SYA9 428 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 CRELD2Q6UXH1 353 aaPredicted RBP12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 FBXO39Q8N4B4 442 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 FBRSQ9HAH7 460 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 NUDT5Q9UKK9 219 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 VPS4AQ9UN37 437 aa12.78□□□□□ -0.36
ATPAF1-205ENST00000487193 TBC1D3DA0A087WVF3 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3IA0A087WXS9 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3EA0A087X179 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3KA0A087X1G2 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3FA6NER0 549 aaPredicted RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3LB9A6J9 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 MID1O15344 667 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 MAGEC1O60732 1142 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 CDKL5O76039 1030 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 IL18RAPO95256 599 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 CLDN1O95832 211 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 ZDHHC11BP0C7U3 371 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3HP0C7X1 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 C7P10643 843 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 HGFP14210 728 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 MAT2AP31153 395 aaKnown RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 STAT4Q14765 748 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3GQ6DHY5 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3CQ6IPX1 549 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 NAPEPLDQ6IQ20 393 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 Q6ZNB5 142 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 EFL1Q7Z2Z2 1120 aaKnown RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 TBC1D3Q8IZP1 549 aaPredicted RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 OR14C36Q8NHC7 312 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 C9orf43Q8TAL5 461 aaPredicted RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 B3GNT5Q9BYG0 378 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 ELOVL4Q9GZR5 314 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 NLGN3Q9NZ94 848 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 CA5BQ9Y2D0 317 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 PCDHGA7Q9Y5G6 932 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 NF1P21359 2839 aa12.77□□□□□ -0.37
ATPAF1-205ENST00000487193 F8P00451 2351 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 WIPF3A6NGB9 483 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 K7ENM7 598 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 AGRPO00253 132 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PLD2O14939 933 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 NEBLO76041 1014 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PRKCGP05129 697 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 UGT1A5P35504 534 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 SLC5A3P53794 718 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PPP2CBP62714 309 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PPP2CAP67775 309 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 RBP5P82980 135 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 CAPRIN2Q6IMN6 1127 aaKnown RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 DPH6Q7L8W6 267 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 ZFAND4Q86XD8 727 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 DIS3L2Q8IYB7 885 aaKnown RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 POM121Q96HA1 1249 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 RSPH9Q9H1X1 276 aaPredicted RBP12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms