RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 CHRNB2P17787 502 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 TNFAIP3P21580 790 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CCR1P32246 355 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 NOS2P35228 1153 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 MATKP42679 507 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 WASP42768 502 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 PXNP49023 591 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 FNTBP49356 437 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 MRPS21P82921 87 aaKnown RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 DEUP1Q05D60 604 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 KLHL30Q0D2K2 578 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 MESP2Q0VG99 397 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CDH18Q13634 790 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CDO1Q16878 200 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 ZC3H12AQ5D1E8 599 aaKnown RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 EOGTQ5NDL2 527 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 FYB2Q5VWT5 728 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 RAP1GAP2Q684P5 730 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 SDE2Q6IQ49 451 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 PRR23BQ6ZRT6 265 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 BEND5Q7L4P6 421 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 TRMT11Q7Z4G4 463 aaKnown RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 ANKS1BQ7Z6G8 1248 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CHPFQ8IZ52 775 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 MAML2Q8IZL2 1156 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 DCLK2Q8N568 766 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 ALLCQ8N6M5 410 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 TXNDC5Q8NBS9 432 aaKnown RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 HJURPQ8NCD3 748 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 TSTD1Q8NFU3 115 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 USP33Q8TEY7 942 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 UCMAQ8WVF2 138 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CPLX3Q8WVH0 158 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 TMA16Q96EY4 203 aaKnown RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 BTN2A3PQ96KV6 586 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 NUP58Q9BVL2 599 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 SELENOOQ9BVL4 669 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 FAM126AQ9BYI3 521 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 POLR3BQ9NW08 1133 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 C2orf42Q9NWW7 574 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 ZSCAN32Q9NX65 697 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 RRN3Q9NYV6 651 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 ADAM22Q9P0K1 906 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 BCCIPQ9P287 314 aaKnown RBP eCLIP10.6□□□□□ -0.71
NEK4-204ENST00000487068 RAB23Q9ULC3 237 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 MYO6Q9UM54 1294 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 PAXBP1Q9Y5B6 917 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 PCDHGA2Q9Y5H1 932 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 DMXL1Q9Y485 3027 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 DNAH14Q0VDD8 3507 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 ANKRD62A6NC57 917 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 CYP1A1P04798 512 aaPredicted RBP10.59□□□□□ -0.71
NEK4-204ENST00000487068 TPM1P09493 284 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 HOXB2P14652 356 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 HOXD9P28356 352 aaPredicted RBP10.59□□□□□ -0.71
NEK4-204ENST00000487068 SLC6A4P31645 630 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 TNFRSF4P43489 277 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 GABRB2P47870 512 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 DGKEP52429 567 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 ATP11AP98196 1134 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 CENPCQ03188 943 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 NR1I3Q14994 352 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 CLEC16AQ2KHT3 1053 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 EMC10Q5UCC4 262 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 EGFLAMQ63HQ2 1017 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 ANO7Q6IWH7 933 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 CEP68Q76N32 757 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 SYT13Q7L8C5 426 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 MFN1Q8IWA4 741 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 FAM217AQ8IXS0 508 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 LGI2Q8N0V4 545 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 PGBD3Q8N328 593 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 PHTF2Q8N3S3 785 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 CARNMT1Q8N4J0 409 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 EMC1Q8N766 993 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 BAP1Q92560 729 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 ERLEC1Q96DZ1 483 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 PRICKLE1Q96MT3 831 aaPredicted RBP10.59□□□□□ -0.71
NEK4-204ENST00000487068 TBCBQ99426 244 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 XPO4Q9C0E2 1151 aaKnown RBP10.59□□□□□ -0.71
NEK4-204ENST00000487068 POLMQ9NP87 494 aaPredicted RBP10.59□□□□□ -0.71
NEK4-204ENST00000487068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.59□□□□□ -0.71
NEK4-204ENST00000487068 MMP17Q9ULZ9 603 aa10.59□□□□□ -0.71
NEK4-204ENST00000487068 SHROOM3Q8TF72 1996 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 TCRBV21S2A2A0A5A6 115 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 ANTXRLA6NF34 631 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 KCNU1A8MYU2 1149 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 H0Y626 953 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 K7ESF4 209 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
NEK4-204ENST00000487068 ALDH1A2O94788 518 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 APBB3O95704 486 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 IGLV3-25P01717 112 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 TACR2P21452 398 aa10.58□□□□□ -0.72
NEK4-204ENST00000487068 MMP8P22894 467 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms