RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 DCAF6Q58WW2 860 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 BZW1Q7L1Q6 419 aaKnown RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 PSTKQ8IV42 348 aaKnown RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 NPLOC4Q8TAT6 608 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 RAB3IL1Q8TBN0 382 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 DNAJB3Q8WWF6 145 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 FAM149B1Q96BN6 582 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 DUSP16Q9BY84 665 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 SLC45A1Q9Y2W3 748 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 H0Y3Z8 333 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 RNF103O00237 685 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 F2P00734 622 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 AXLP30530 894 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 AP1B1Q10567 949 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 CASC4Q6P4E1 433 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 MARK2Q7KZI7 788 aaKnown RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 B3GALNT2Q8NCR0 500 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 CEP41Q9BYV8 373 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 EIF2B3Q9NR50 452 aaKnown RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.69□□□□□ -0.38
PTCD2-204ENST00000486995 CCL15-CCL14A0A0B4J2E2 113 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 CLDN5O00501 218 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 OPHN1O60890 802 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 DAB1O75553 588 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 ALDOAP04075 364 aaKnown RBP12.69□□□□□ -0.38
PTCD2-204ENST00000486995 KITP10721 976 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 MGAT1P26572 445 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 GLUD2P49448 558 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 NDUFV1P49821 464 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
PTCD2-204ENST00000486995 LILRA4P59901 499 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 WASHC5Q12768 1159 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 SNX17Q15036 470 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 CCL15Q16663 113 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 PAQR9Q6ZVX9 377 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 TREML1Q86YW5 311 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 BRI3BPQ8WY22 251 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 ANKRD27Q96NW4 1050 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 NPY6RQ99463 290 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 DCLRE1BQ9H816 532 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 PRDM16Q9HAZ2 1276 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 MARCOQ9UEW3 520 aaPredicted RBP12.69□□□□□ -0.38
PTCD2-204ENST00000486995 SYNJ2BP-COX16A0A087WUM0 186 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 HUS1O60921 280 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 NOS2P35228 1153 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 AQP5P55064 265 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 ADAM17P78536 824 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 CDK18Q07002 472 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 CRYMQ14894 314 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 NAA25Q14CX7 972 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 SV2CQ496J9 727 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 SYPL2Q5VXT5 272 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 PACS1Q6VY07 963 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 KYAT3Q6YP21 454 aaKnown RBP12.69□□□□□ -0.38
PTCD2-204ENST00000486995 ZCCHC23Q6ZST2 131 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 CRLF3Q8IUI8 442 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 TP53INP2Q8IXH6 220 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 COX16Q9P0S2 106 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 EMCNQ9ULC0 261 aa12.69□□□□□ -0.38
PTCD2-204ENST00000486995 HBS1LQ9Y450 684 aaKnown RBP12.69□□□□□ -0.38
PTCD2-204ENST00000486995 XPOTO43592 962 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PSMB4P28070 264 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PTDSS1P48651 473 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 IRX4P78413 519 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 STX3Q13277 289 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PDE1CQ14123 709 aaPredicted RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 TAF11Q15544 211 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 STXBP5Q5T5C0 1151 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 ZNF567Q8N184 647 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 MIEF2Q96C03 454 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PRDM12Q9H4Q4 367 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 THAP1Q9NVV9 213 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PSAT1Q9Y617 370 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 H3BRJ5 948 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 M0QYT0 321 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 TPP1O14773 563 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 CREB3O43889 395 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 NPR3P17342 541 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PGAM1P18669 254 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 IGFBP6P24592 240 aaPredicted RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 ACAT1P24752 427 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 DPYSQ14117 519 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 KPNB1Q14974 876 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PDK1Q15118 436 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 FASTKD1Q53R41 847 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 ACSBG2Q5FVE4 666 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 HFE2Q6ZVN8 426 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 CCNJLQ8IV13 435 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms