RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SH3RF2Q8TEC5 729 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SMARCD2Q92925 531 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 CD101Q93033 1021 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 RNF34Q969K3 372 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ASB16Q96NS5 453 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 TKTL2Q9H0I9 626 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 IRF2BPLQ9H1B7 796 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 MFSD1Q9H3U5 465 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 WDCPQ9H6R7 721 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ZWILCHQ9H900 591 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 TDP1Q9NUW8 608 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ARHGEF38Q9NXL2 777 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 CFAP97Q9P2B7 532 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 XPO7Q9UIA9 1087 aaKnown RBP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 DMXL1Q9Y485 3027 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SNX10Q9Y5X0 201 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 SPOPO43791 374 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 KIF5CO60282 957 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-229ENST00000486665 LAMP2P13473 410 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 AOC1P19801 751 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 FCARP24071 287 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 CCR1P32246 355 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 CLCN5P51795 746 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 RING1Q06587 406 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 TDGQ13569 410 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 CA9Q16790 459 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 KCNT1Q5JUK3 1230 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 BRMS1LQ5PSV4 323 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 TANGO2Q6ICL3 276 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 SYCE1Q8N0S2 351 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 TTC16Q8NEE8 873 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 KRT35Q92764 455 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 PLD4Q96BZ4 506 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 ACSF2Q96CM8 615 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-229ENST00000486665 NCAPGQ9BPX3 1015 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 TRPV4Q9HBA0 871 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 AGO1Q9UL18 857 aaKnown RBP13.25□□□□□ -0.29
HDAC6-229ENST00000486665 FZD10Q9ULW2 581 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 PACSIN2Q9UNF0 486 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-229ENST00000486665 DUSP12Q9UNI6 340 aa13.25□□□□□ -0.29
HDAC6-229ENST00000486665 GOLGA6L7A0A1B0GV03 622 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 KRBA1A5PL33 1030 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 PRPSAP2O60256 369 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 PAGE1O75459 146 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 RARAP10276 462 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 DESP17661 470 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 CORO1AP31146 461 aaKnown RBP13.24□□□□□ -0.29
HDAC6-229ENST00000486665 GJC1P36383 396 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 GNG11P61952 73 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 ZNF77Q15935 545 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 BOLA3Q53S33 107 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 MEI1Q5TIA1 1274 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 PARM1Q6UWI2 310 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 HTR3DQ70Z44 454 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 OTOP3Q7RTS5 596 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 PEX26Q7Z412 305 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 C14orf80Q86SX3 495 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 DENND1CQ8IV53 801 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 UNC45BQ8IWX7 931 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 SIX5Q8N196 739 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 PYROXD2Q8N2H3 581 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 CELF5Q8N6W0 485 aaKnown RBP13.24□□□□□ -0.29
HDAC6-229ENST00000486665 TRIM58Q8NG06 486 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 NTAN1Q96AB6 310 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
HDAC6-229ENST00000486665 PLA2G2FQ9BZM2 168 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 EPS15L1Q9UBC2 864 aa13.24□□□□□ -0.29
HDAC6-229ENST00000486665 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 DDX3YO15523 660 aaKnown RBP13.23□□□□□ -0.29
HDAC6-229ENST00000486665 ACSL4O60488 711 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 APOEP02649 317 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 SLC2A3P11169 496 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 TCF3P15923 654 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 CTNNA2P26232 953 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 GGCXP38435 758 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 HARS2P49590 506 aaKnown RBP13.23□□□□□ -0.29
HDAC6-229ENST00000486665 PEX5P50542 639 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 ARSEP51690 589 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 USP4Q13107 963 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 HADHQ16836 314 aaKnown RBP13.23□□□□□ -0.29
HDAC6-229ENST00000486665 ARTNQ5T4W7 220 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 PIK3R6Q5UE93 754 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 LRRC38Q5VT99 294 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 NADSYN1Q6IA69 706 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 Q6ZNB5 142 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 CCDC105Q8IYK2 499 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms