RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GCLMP48507 274 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 IRX4P78413 519 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 PPP3CAQ08209 521 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 ZACNQ401N2 412 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 CBWD6Q4V339 395 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 CBWD3Q5JTY5 395 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 CBWD5Q5RIA9 395 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 HECTD3Q5T447 861 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 PMS2CLQ68D20 193 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 RNF43Q68DV7 783 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 IL31Q6EBC2 164 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 ETFBKMTQ8IXQ9 262 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 TMEFF1Q8IYR6 380 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 SLC35F6Q8N357 371 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 TAS1R2Q8TE23 839 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 WHAMMQ8TF30 809 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 EDEM2Q9BV94 578 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 SLC6A17Q9H1V8 727 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 CD93Q9NPY3 652 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 ARHGEF4Q9NR80 690 aa9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 TNRC6BQ9UPQ9 1833 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-208ENST00000486159 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 A0A0A0MRY4 1105 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 A0A0A6YYK5 440 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 LNP1A1A4G5 178 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 FAM92AA1XBS5 289 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 CDX4O14627 284 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 TULP3O75386 442 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 RTN3O95197 1032 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 KCNK5O95279 499 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 ASS1P00966 412 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PLEKP08567 350 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 CD58P19256 250 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PMLP29590 882 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PTGER3P43115 390 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PPP3CCP48454 512 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 DHPSP49366 369 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 LIMK1P53667 647 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 MFAP3P55082 362 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 MRPS21P82921 87 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 DRAP1Q14919 205 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 ANO4Q32M45 955 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 MAP7D1Q3KQU3 841 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 SNX30Q5VWJ9 437 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PAPD7Q5XG87 772 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 CLEC20AQ6ZU45 233 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 CRYBG2Q8N1P7 616 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 FBXL13Q8NEE6 735 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 OLIG1Q8TAK6 271 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 HMGB4Q8WW32 186 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PIGKQ92643 395 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 SEMA4DQ92854 862 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 BHMTQ93088 406 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 ACDQ96AP0 544 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 SMARCD1Q96GM5 515 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 CEP295NLQ96MC4 621 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 NT5C1BQ96P26 610 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 NOX5Q96PH1 765 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 DMAP1Q9NPF5 467 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 VPS45Q9NRW7 570 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PLK2Q9NYY3 685 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 SH3BP1Q9Y3L3 701 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 JRKLQ9Y4A0 524 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 PCDHGA5Q9Y5G8 931 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 RAD54BQ9Y620 910 aa9.83□□□□□ -0.84
TMEM39A-208ENST00000486159 CEP192Q8TEP8 1941 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 A0A1W2PQH9 124 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TCRBV21S2A2A0A5A6 115 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 E2F8A0AVK6 867 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TBC1D3BA6NDS4 549 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 WASH3PC4AMC7 463 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 PRRT4C9JH25 899 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TLR5O60602 858 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 RHOBTB1O94844 696 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 APODP05090 189 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TUBBP07437 444 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 PFKLP17858 780 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 PIK3CAP42336 1068 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 PDE6CP51160 858 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 GCNT1Q02742 428 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 GAD2Q05329 585 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 PTK2Q05397 1052 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 GFPT1Q06210 699 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 CKAP4Q07065 602 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 ELF2Q15723 593 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 SGSM1Q2NKQ1 1148 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 ZNF394Q53GI3 561 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 USP39Q53GS9 565 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 EGFLAMQ63HQ2 1017 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 PSAPL1Q6NUJ1 521 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 KIAA1211LQ6NV74 962 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TPGS1Q6ZTW0 290 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 SCD5Q86SK9 330 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 UBXN4Q92575 508 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 NDRG1Q92597 394 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TATDN2Q93075 761 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 TNIP3Q96KP6 325 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 LACRTQ9GZZ8 138 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms