RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 WT1P19544 449 aaPredicted RBP6.85□□□□□ -1.31
RTN4-214ENST00000486085 MMP8P22894 467 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 CLK3P49761 638 aaKnown RBP6.85□□□□□ -1.31
RTN4-214ENST00000486085 RENBPP51606 427 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 GPC5P78333 572 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 TANGO2Q6ICL3 276 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 TRIM72Q6ZMU5 477 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 BCDIN3DQ7Z5W3 292 aaKnown RBP6.85□□□□□ -1.31
RTN4-214ENST00000486085 TRABD2AQ86V40 505 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 MYRIPQ8NFW9 859 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 RSC1A1Q92681 617 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 FAM167BQ9BTA0 163 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 MRIQ9BWK5 157 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 CHMP4AQ9BY43 222 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 DEPDC5O75140 1603 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 TSPOAP1O95153 1857 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 DHX29Q7Z478 1369 aaKnown RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 RNF17Q9BXT8 1623 aaKnown RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 SPAG9O60271 1321 aaKnown RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 CCDC187A0A096LP49 1063 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 HMX3A6NHT5 357 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 TARM1B6A8C7 271 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 APEHP13798 732 aaKnown RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 GALNSP34059 522 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 IGHMBP2P38935 993 aaKnown RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 PPM1FP49593 454 aaPredicted RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 TAF5Q15542 800 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 SERPINA13PQ6UXR4 307 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 RRAGAQ7L523 313 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 CERS3Q8IU89 383 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 MAFAQ8NHW3 353 aaPredicted RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 REPS1Q96D71 796 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 EDC3Q96F86 508 aaKnown RBP6.84□□□□□ -1.31
RTN4-214ENST00000486085 SORCS2Q96PQ0 1159 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 SNX18Q96RF0 628 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 CCDC134Q9H6E4 229 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 PRDM8Q9NQV8 689 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 SEMA4GQ9NTN9 838 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 WNT6Q9Y6F9 365 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 ATP10AO60312 1499 aa6.84□□□□□ -1.31
RTN4-214ENST00000486085 ABCA6Q8N139 1617 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 VWDEQ8N2E2 1590 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 PRDM15P57071 1507 aaPredicted RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 FAM90A18PA6NE21 464 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 FAM90A16PA6NEW6 464 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 FAM90A9PA6NNJ1 464 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 FAM90A5PA8MXJ8 464 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 M0QYT0 321 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 FAM90A15PP0C7V4 464 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 FAM90A14PP0C7W9 464 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 DHRS4L1P0CG22 281 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 JAK3P52333 1124 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 RAE1P78406 368 aaKnown RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 CFHR3Q02985 330 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 ZNF569Q5MCW4 686 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 ANKRD40Q6AI12 368 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 HMGB4Q8WW32 186 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 REXO5Q96IC2 774 aaKnown RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 CCDC17Q96LX7 622 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 HS6ST2Q96MM7 605 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 TRAPPC9Q96Q05 1148 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 PAAF1Q9BRP4 392 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 MECRQ9BV79 373 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 VPS16Q9H269 839 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 ELAC1Q9H777 363 aaKnown RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 ITM2CQ9NQX7 267 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 RXFP3Q9NSD7 469 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 ASIC5Q9NY37 505 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 SRP68Q9UHB9 627 aaKnown RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 DAPP1Q9UN19 280 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 CNTN6Q9UQ52 1028 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 COL11A2P13942 1736 aaPredicted RBP6.83□□□□□ -1.32
RTN4-214ENST00000486085 ANKRD50Q9ULJ7 1429 aa6.83□□□□□ -1.32
RTN4-214ENST00000486085 KIF15Q9NS87 1388 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 UNC13BO14795 1591 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 LMTK2Q8IWU2 1503 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 A2MP01023 1474 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 SMIM22K7EJ46 135 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 FYB1O15117 783 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 GCATO75600 419 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 NUDT3O95989 172 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 MT-CO3P00414 261 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 MBPP02686 304 aaPredicted RBP6.82□□□□□ -1.32
RTN4-214ENST00000486085 THBS4P35443 961 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 SF3A3Q12874 501 aaKnown RBP eCLIP6.82□□□□□ -1.32
RTN4-214ENST00000486085 RPS6KA2Q15349 733 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 FAM187BQ17R55 369 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 TRIM60Q495X7 471 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 STRIP1Q5VSL9 837 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 ACSM6Q6P461 480 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 NFRKBQ6P4R8 1299 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 TMEM65Q6PI78 240 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 C16orf89Q6UX73 402 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 RAB11FIP2Q7L804 512 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 ZNF354CQ86Y25 554 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 SUGP1Q8IWZ8 645 aaKnown RBP6.82□□□□□ -1.32
RTN4-214ENST00000486085 AFAP1Q8N556 730 aa6.82□□□□□ -1.32
RTN4-214ENST00000486085 C3orf49Q96BT1 292 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms