RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 MMP21Q8N119 569 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 SLC22A17Q8WUG5 538 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 EBF3Q9H4W6 596 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 CERS4Q9HA82 394 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 SEMA4BQ9NPR2 832 aaPredicted RBP4.49□□□□□ -1.69
VPS41-213ENST00000485955 NECTIN3Q9NQS3 549 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 MSRB1Q9NZV6 116 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 IGSF9Q9P2J2 1179 aa4.49□□□□□ -1.69
VPS41-213ENST00000485955 GXYLT2A0PJZ3 443 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 H3BNX3 289 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 INSIG1O15503 277 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 TLX3O43711 291 aaPredicted RBP4.48□□□□□ -1.69
VPS41-213ENST00000485955 PLA2G6O60733 806 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 CAND2O75155 1236 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 CER1O95813 267 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 NBPF7P0C2Y1 421 aaPredicted RBP4.48□□□□□ -1.69
VPS41-213ENST00000485955 TFEBP19484 476 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 PGM5Q15124 567 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 MIDNQ504T8 468 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 ZNF474Q6S9Z5 364 aaPredicted RBP4.48□□□□□ -1.69
VPS41-213ENST00000485955 ZNF517Q6ZMY9 492 aaPredicted RBP4.48□□□□□ -1.69
VPS41-213ENST00000485955 UEVLDQ8IX04 471 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 SAMD14Q8IZD0 417 aaPredicted RBP4.48□□□□□ -1.69
VPS41-213ENST00000485955 ADGRF4Q8IZF3 695 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 IPO4Q8TEX9 1081 aaKnown RBP4.48□□□□□ -1.69
VPS41-213ENST00000485955 NSMCE1Q8WV22 266 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 PAAF1Q9BRP4 392 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 PIMREGQ9BSJ6 248 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 KCNK9Q9NPC2 374 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 FBXO28Q9NVF7 368 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 CA14Q9ULX7 337 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 COG5Q9UP83 839 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 CEP83Q9Y592 693 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 SQORQ9Y6N5 450 aa4.48□□□□□ -1.69
VPS41-213ENST00000485955 A0A0G2JK05 382 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 HNRNPDLO14979 420 aaKnown RBP4.47□□□□□ -1.69
VPS41-213ENST00000485955 ATG13O75143 517 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 TULP3O75386 442 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 NDUFB8O95169 186 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 CRYABP02511 175 aaKnown RBP4.47□□□□□ -1.69
VPS41-213ENST00000485955 KRT18P05783 430 aaKnown RBP4.47□□□□□ -1.69
VPS41-213ENST00000485955 ANXA6P08133 673 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 SNHG28P0DPA3 235 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 AKR1A1P14550 325 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 ABCB4P21439 1286 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 SLC37A1P57057 533 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 CSHL1Q14406 222 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 PIM3Q86V86 326 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 SLC25A28Q96A46 364 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 SGCZQ96LD1 299 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 ZNF347Q96SE7 839 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 MYD88Q99836 296 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 PAPOLBQ9NRJ5 636 aaKnown RBP4.47□□□□□ -1.69
VPS41-213ENST00000485955 HELLSQ9NRZ9 838 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 TM7SF3Q9NS93 570 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 SLC39A10Q9ULF5 831 aa4.47□□□□□ -1.69
VPS41-213ENST00000485955 EMSYQ7Z589 1322 aa4.46□□□□□ -1.69
VPS41-213ENST00000485955 LOC105369274A0A096LPK9 316 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 LOC102723532A0A0G2JNH3 316 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 IGLV5-39A0A0G2JS06 123 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 B4DGG1 531 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 PIP5K1BO14986 540 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 PPP6R2O75170 966 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 USP12O75317 370 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 EPN2O95208 641 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 SGPL1O95470 568 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 TOMM40O96008 361 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 KLRK1P26718 216 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 TBX4P57082 545 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 PICALMQ13492 652 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 MANEAQ5SRI9 462 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 LIPMQ5VYY2 423 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 NUGGCQ68CJ6 796 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 TTLL5Q6EMB2 1281 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 SRLQ86TD4 932 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 TTC30AQ86WT1 665 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 ZDHHC17Q8IUH5 632 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 OR4N4Q8N0Y3 316 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 EXD3Q8N9H8 876 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 KAT2BQ92831 832 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 EME1Q96AY2 570 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 TUBB6Q9BUF5 446 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 STK33Q9BYT3 514 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 TRIM2Q9C040 744 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 FAM234AQ9H0X4 552 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 THSD1Q9NS62 852 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 AGO2Q9UKV8 859 aaKnown RBP4.46□□□□□ -1.7
VPS41-213ENST00000485955 PCDHA12Q9UN75 941 aa4.46□□□□□ -1.7
VPS41-213ENST00000485955 UBE2J1Q9Y385 318 aaPredicted RBP4.46□□□□□ -1.7
VPS41-213ENST00000485955 KIR2DS5A0A0G2JLQ3 304 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 TMEM272A0A1B0GTI8 110 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 FAM90A10PA6NDY2 464 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 F8W810 466 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 KIR2DS3K7RE56 304 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 PRC1O43663 620 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 WNT1P04628 370 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 ALPLP05186 524 aa4.45□□□□□ -1.7
VPS41-213ENST00000485955 MYL1P05976 194 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms