RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TNFRSF8P28908 595 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ATP5C1P36542 298 aaKnown RBP11.73□□□□□ -0.53
SND1-212ENST00000485871 TBX4P57082 545 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 NTHL1P78549 312 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ZXDBP98169 803 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ADCY2Q08462 1091 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ADAM15Q13444 863 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 DPYSL3Q14195 570 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 COL19A1Q14993 1142 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 PDK2Q15119 407 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 LONRF2Q1L5Z9 754 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 SLC5A9Q2M3M2 681 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 TFDP3Q5H9I0 405 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 STXBP5Q5T5C0 1151 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 SEL1L2Q5TEA6 688 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 SYCE2Q6PIF2 218 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 PYROXD2Q8N2H3 581 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ELMOD1Q8N336 334 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 C12orf76Q8N812 135 aaPredicted RBP11.73□□□□□ -0.53
SND1-212ENST00000485871 LEMD2Q8NC56 503 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 WBP2Q969T9 261 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 TCEAL4Q96EI5 215 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 NAP1L3Q99457 506 aaPredicted RBP11.73□□□□□ -0.53
SND1-212ENST00000485871 RHOXF2Q9BQY4 288 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 OSBPL8Q9BZF1 889 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 WDCPQ9H6R7 721 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 SFXN1Q9H9B4 322 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ASAH2Q9NR71 780 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.73□□□□□ -0.53
SND1-212ENST00000485871 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.73□□□□□ -0.53
SND1-212ENST00000485871 ZNF446Q9NWS9 450 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
SND1-212ENST00000485871 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 HBS1LQ9Y450 684 aaKnown RBP11.73□□□□□ -0.53
SND1-212ENST00000485871 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 MTCH2Q9Y6C9 303 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 A0A1W2PRU2 124 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 SLC12A8A0AV02 714 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 SOBPA7XYQ1 873 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 CCDC188H7C350 402 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 GREM1O60565 184 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 XYLBO75191 536 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 PAGE1O75459 146 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 FGF19O95750 216 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 FGGP02679 453 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 MYL4P12829 197 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 KRT10P13645 584 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 CCR1P32246 355 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 CDH6P55285 790 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 SLC7A9P82251 487 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 TXNDC8Q6A555 127 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 ELMSAN1Q6PJG2 1045 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 GRASPQ7Z6J2 395 aaPredicted RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 MIB1Q86YT6 1006 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 ZNF683Q8IZ20 524 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 PQLC3Q8N755 202 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 ARL14EPQ8N8R7 260 aaPredicted RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 NOA1Q8NC60 698 aaKnown RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
SND1-212ENST00000485871 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 HAPLN3Q96S86 360 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 ZNF670Q9BS34 389 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 OSBPL2Q9H1P3 480 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 DHX35Q9H5Z1 703 aaKnown RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 VIPAS39Q9H9C1 493 aa11.72□□□□□ -0.53
SND1-212ENST00000485871 CWC15Q9P013 229 aaKnown RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
SND1-212ENST00000485871 FAM72CH0Y354 149 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 MAP2K7O14733 419 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 STC2O76061 302 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 KLKB1P03952 638 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 HOXC13P31276 330 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 KPNA1P52294 538 aaPredicted RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 GABPB1Q06547 395 aaPredicted RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 DPYSQ14117 519 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 LLGL1Q15334 1064 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 TEAD2Q15562 447 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 CYP1B1Q16678 543 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 EFHC2Q5JST6 749 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 FAM72AQ5TYM5 149 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 PIK3R6Q5UE93 754 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 FAM72DQ6L9T8 149 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 C8orf74Q6P047 294 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 BBS12Q6ZW61 710 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 PDZD4Q76G19 769 aaPredicted RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.531e-7■■□□□ 11.8
SND1-212ENST00000485871 GPR149Q86SP6 731 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 FAM72BQ86X60 149 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 EIF1ADQ8N9N8 165 aaKnown RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 KCTD6Q8NC69 237 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 PCDH19Q8TAB3 1148 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms