RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 F8VZ95 297 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 K7EQS6 105 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SLC9A3R1O14745 358 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 NCAM2O15394 837 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 FBXO21O94952 628 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 LETM1O95202 739 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 CAVIN2O95810 425 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 LATS1O95835 1130 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 EGFP01133 1207 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 PENKP01210 267 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 CISD3P0C7P0 127 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 RARGP13631 454 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 PLA2G5P39877 138 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 KIR2DL1P43626 348 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 MTIF2P46199 727 aaKnown RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 SLC6A11P48066 632 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 GALK1P51570 392 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 TKTL1P51854 596 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 COPB1P53618 953 aaKnown RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 COG7P83436 770 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 ADIGQ0VDE8 80 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 PTP4A2Q12974 167 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 MTAPQ13126 283 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SRSF5Q13243 272 aaKnown RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 ENPP2Q13822 863 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 DRAP1Q14919 205 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 DHCR24Q15392 516 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 DGKKQ5KSL6 1271 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 BSPRYQ5W0U4 402 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SASS6Q6UVJ0 657 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 TOGARAM2Q6ZUX3 1019 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 ARCQ7LC44 396 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 KIAA0907Q7Z7F0 614 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 LUZP1Q86V48 1076 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 PASD1Q8IV76 773 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 HOMEZQ8IX15 550 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 ARHGAP18Q8N392 663 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 CPXM2Q8N436 756 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SPEM1Q8N4L4 309 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
CUX1-208ENST00000485792 ZNF397Q8NF99 534 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 FLCNQ8NFG4 579 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 OR52K2Q8NGK3 314 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 CSGALNACT1Q8TDX6 532 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SLC39A13Q96H72 371 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 LMLNQ96KR4 655 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 NAP1L5Q96NT1 182 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 CDK5RAP1Q96SZ6 601 aaKnown RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 PCDHB18PQ96TA0 734 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 FAM126AQ9BYI3 521 aaPredicted RBP5.98□□□□□ -1.45
CUX1-208ENST00000485792 IRF2BPLQ9H1B7 796 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 ABCC13Q9NSE7 274 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 ASNSD1Q9NWL6 643 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 HESX1Q9UBX0 185 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 DNMT3LQ9UJW3 386 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 TDRD6O60522 2096 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 CCDC163A0A0D9SF12 145 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 A0A1W2PQC6 194 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 E5RJQ4 531 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 H0Y858 1186 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 M0QYV0 167 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 RNF103O00237 685 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CACNG3O60359 315 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 NFATC1O95644 943 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CYP1A1P04798 512 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 GLI1P08151 1106 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SP9P0CG40 484 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 IRF1P10914 325 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 MBL2P11226 248 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 CD19P15391 556 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CYP11B1P15538 503 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 PTMSP20962 102 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 DRD1P21728 446 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 GNA15P30679 374 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SLC6A4P31645 630 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 GPC1P35052 558 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SCNN1AP37088 669 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CTSOP43234 321 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 ACADSBP45954 432 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 RNF144AP50876 292 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 ATXN1P54253 815 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 SEC13P55735 322 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 GSCP56915 257 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 SLC8A3P57103 927 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 BPIFB4P59827 614 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 YWHAGP61981 247 aaKnown RBP eCLIP5.97□□□□□ -1.45
CUX1-208ENST00000485792 AMPD2Q01433 879 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 FMO1Q01740 532 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SATB1Q01826 763 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 PDCLQ13371 301 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 NR1I3Q14994 352 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 PON2Q15165 354 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 ANGPT1Q15389 498 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 FBXO43Q4G163 708 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 C2orf27AQ580R0 203 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 FAM133BQ5BKY9 247 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 FIGNQ5HY92 759 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 FYB2Q5VWT5 728 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SYPL2Q5VXT5 272 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 TMEM215Q68D42 235 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms