RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	MPL	P40238	635 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	AVPR1B	P47901	424 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	EEFSEC	P57772	596 aa	Known RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TAS2R50	P59544	299 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	GPC5	P78333	572 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	MRPS35	P82673	323 aa	Known RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	RNASEL	Q05823	741 aa	Known RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TBL3	Q12788	808 aa	Known RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	LMAN2	Q12907	356 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	MPP3	Q13368	585 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	THOC5	Q13769	683 aa	Known RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SPATS1	Q496A3	300 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	FBLN7	Q53RD9	439 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SLC9C2	Q5TAH2	1124 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	FNDC7	Q5VTL7	733 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TMEM88	Q6PEY1	159 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	LAS2	Q8IYD9	372 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TCP11L2	Q8N4U5	519 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	LINC01465	Q8N7H1	131 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SRFBP1	Q8NEF9	429 aa	Known RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SLC9A6	Q92581	669 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	ARRDC3	Q96B67	414 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	KAZALD1	Q96I82	304 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	C7orf26	Q96N11	449 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	RNF26	Q9BY78	433 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TAOK3	Q9H2K8	898 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SYNPO2L	Q9H987	977 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	RMI1	Q9H9A7	625 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SMC4	Q9NTJ3	1288 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	ABHD10	Q9NUJ1	306 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	ADAMTS5	Q9UNA0	930 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	RCE1	Q9Y256	329 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	PCDHB2	Q9Y5E7	798 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	COL4A3	Q01955	1670 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567		A0A087X0M5	115 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567		A0A1B0GX30	115 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567		H0YIZ8	118 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	PRAMEF2	O60811	474 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	TMEM63A	O94886	807 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	ALDOA	P04075	364 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	CSF1	P09603	554 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	ACP5	P13686	325 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	CPA1	P15085	419 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	PGM1	P36871	562 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	CASP6	P55212	293 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	DGCR2	P98153	550 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	ERCC6L	Q2NKX8	1250 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	LSM12	Q3MHD2	195 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	L1TD1	Q5T7N2	865 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	C4orf50	Q6ZRC1	276 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	PEG10	Q86TG7	708 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	LINS1	Q8NG48	757 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	TBC1D5	Q92609	795 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	RNF125	Q96EQ8	232 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	MASTL	Q96GX5	879 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	RBM17	Q96I25	401 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	PDLIM2	Q96JY6	352 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	FUZ	Q9BT04	418 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	HERC2P3	Q9BVR0	1158 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	ELOVL1	Q9BW60	279 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	USP29	Q9HBJ7	922 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	PDE11A	Q9HCR9	933 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	ALG13	Q9NP73	1137 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	FBXO2	Q9UK22	296 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	SUFU	Q9UMX1	484 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	ARHGAP26	Q9UNA1	814 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	GDA	Q9Y2T3	454 aa		4.53	□□□□□ -1.68
FN1-222	ENST00000485567	COPG1	Q9Y678	874 aa	Known RBP	4.53	□□□□□ -1.68
FN1-222	ENST00000485567	TTC34	A8MYJ7	566 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567		H3BNC9	293 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	ZNF213	O14771	459 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	ANP32C	O43423	234 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	DHX16	O60231	1041 aa	Known RBP	4.52	□□□□□ -1.69
FN1-222	ENST00000485567	TULP3	O75386	442 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	TBX18	O95935	607 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	SFPQ	P23246	707 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
FN1-222	ENST00000485567	GALNS	P34059	522 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	ADRA1B	P35368	520 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	GPD2	P43304	727 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	RAE1	P78406	368 aa	Known RBP	4.52	□□□□□ -1.69
FN1-222	ENST00000485567	GPR162	Q16538	588 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	LRRC24	Q50LG9	513 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	RNASE12	Q5GAN4	147 aa	Known RBP	4.52	□□□□□ -1.69
FN1-222	ENST00000485567	PCID2	Q5JVF3	399 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	KIRREL2	Q6UWL6	708 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	KYAT3	Q6YP21	454 aa	Known RBP	4.52	□□□□□ -1.69
FN1-222	ENST00000485567	SLC39A5	Q6ZMH5	540 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	SYNE3	Q6ZMZ3	975 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	ZNF804A	Q7Z570	1209 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	GPATCH11	Q8N954	259 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	ZCCHC10	Q8TBK6	192 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	CLEC4C	Q8WTT0	213 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	CENPI	Q92674	756 aa	Predicted RBP	4.52	□□□□□ -1.69
FN1-222	ENST00000485567	STAM	Q92783	540 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	ZUFSP	Q96AP4	578 aa		4.52	□□□□□ -1.69
FN1-222	ENST00000485567	SH3KBP1	Q96B97	665 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms