RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TMEM176AQ96HP8 235 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF419Q96HQ0 510 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 YTHDC1Q96MU7 727 aaKnown RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 CYP2S1Q96SQ9 504 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 LGMNQ99538 433 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 CCDC94Q9BW85 323 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 TRIT1Q9H3H1 467 aaKnown RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 TRPC7Q9HCX4 862 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 TOPORSQ9NS56 1045 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 UBP1Q9NZI7 540 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 GMIPQ9P107 970 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 MAGED2Q9UNF1 606 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 PAXBP1Q9Y5B6 917 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 PCDHB14Q9Y5E9 798 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 HEMK1Q9Y5R4 338 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-210ENST00000485247 TSC2P49815 1807 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 MGAQ8IWI9 3026 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 COL12A1Q99715 3063 aa5.75□□□□□ -1.49
PTPN4-210ENST00000485247 PLXND1Q9Y4D7 1925 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 MYMKA6NI61 221 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ENO4A6NNW6 628 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 M0QZQ0 153 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 SLC27A2O14975 620 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 SGSM2O43147 1006 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 PRPF3O43395 683 aaKnown RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 BRINP1O60477 761 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 KAT7O95251 611 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ATE1O95260 518 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 NFATC1O95644 943 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 MYF5P13349 255 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ATP2B1P20020 1258 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 DDX6P26196 483 aaKnown RBP eCLIP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 CHMLP26374 656 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 HNF1BP35680 557 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 WASP42768 502 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 KIR2DL1P43626 348 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 TMPRSS3P57727 454 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 AKAP17AQ02040 695 aaKnown RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 NFATC3Q12968 1075 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 DMP1Q13316 513 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 MYBPC2Q14324 1141 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF268Q14587 947 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 MLANAQ16655 118 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 INF2Q27J81 1249 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 HSF5Q4G112 596 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 SLC39A12Q504Y0 691 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ZC2HC1CQ53FD0 456 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ARSHQ5FYA8 562 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 WDR45BQ5MNZ6 344 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 NT5DC1Q5TFE4 455 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 BROXQ5VW32 411 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 OVOS1Q6IE37 1185 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 DSTYKQ6XUX3 929 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 USP49Q70CQ1 688 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 APBB1IPQ7Z5R6 666 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 MON1AQ86VX9 555 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF513Q8N8E2 541 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 DEPTORQ8TB45 409 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 PIGOQ8TEQ8 1089 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 FAM20AQ96MK3 541 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 SLC22A12Q96S37 553 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 PNKPQ96T60 521 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 KIFC3Q9BVG8 833 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ASPNQ9BXN1 380 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 C22orf23Q9BZE7 217 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 CCDC113Q9H0I3 377 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 C2orf40Q9H1Z8 148 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 SP110Q9HB58 689 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 KCNMB3Q9NPA1 279 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 CD93Q9NPY3 652 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ANKEF1Q9NU02 776 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 GPATCH2Q9NW75 528 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 TUBGCP4Q9UGJ1 667 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 DUSP13Q9UII6 198 aa5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF638Q14966 1978 aaKnown RBP5.74□□□□□ -1.49
PTPN4-210ENST00000485247 ATMQ13315 3056 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 NID2Q14112 1375 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 KNTC1P50748 2209 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 CCDC196A0A1B0GTZ2 297 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 A0A1B0GVT2 93 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 MEI4A8MW99 385 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 BTBD18B2RXH4 712 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 RGS13O14921 159 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 BCAT2O15382 392 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF217O75362 1048 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 APODP05090 189 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 CYP17A1P05093 508 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 CKMP06732 381 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 HOXB2P14652 356 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 GSPT1P15170 499 aaKnown RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 KCNE1P15382 129 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 HMGA1P17096 107 aaKnown RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 POLR2BP30876 1174 aaKnown RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 ACTN2P35609 894 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 CCR10P46092 362 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 HK2P52789 917 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 BNC1Q01954 994 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 CLCQ05315 142 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 KDSRQ06136 332 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms