RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 A0A1B0GVT2 93 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 E9PAM4 449 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 XPO1O14980 1071 aaKnown RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 DFNA5O60443 496 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 ATXN1LP0C7T5 689 aaKnown RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 PFKFB1P16118 471 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 ACSL1P33121 698 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 CSNK1EP49674 416 aaKnown RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 TKTL1P51854 596 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 ARID5AQ03989 594 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 DNM1Q05193 864 aaKnown RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 CAMK2BQ13554 666 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 TEAD4Q15561 434 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 PTPRNQ16849 979 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 KIF19Q2TAC6 998 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 EDRF1Q3B7T1 1238 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 SOWAHCQ53LP3 525 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 ADIPOR2Q86V24 386 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 ZNF557Q8N988 423 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 FOXD4L4Q8WXT5 416 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 GOLGA1Q92805 767 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 IGSF8Q969P0 613 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 TMA16Q96EY4 203 aaKnown RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 C6orf106Q9H6K1 298 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-227ENST00000485102 SGK2Q9HBY8 427 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 ANKRD6Q9Y2G4 727 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
HDAC6-227ENST00000485102 TNFSF14O43557 240 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 STX10O60499 249 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 DLDP09622 509 aaKnown RBP13.58□□□□□ -0.24
HDAC6-227ENST00000485102 CD27P26842 260 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 GRK6P43250 576 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 BCAT1P54687 386 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.24
HDAC6-227ENST00000485102 DPYDQ12882 1025 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 SMAD1Q15797 465 aaKnown RBP13.58□□□□□ -0.24
HDAC6-227ENST00000485102 COL28A1Q2UY09 1125 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 FOXD4L6Q3SYB3 417 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-227ENST00000485102 BSPRYQ5W0U4 402 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 FOXD4L3Q6VB84 417 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-227ENST00000485102 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 KCTD13Q8WZ19 329 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 AZIN2Q96A70 460 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 BIRC7Q96CA5 298 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 ARID3AQ99856 593 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 ORAI3Q9BRQ5 295 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 ULBP1Q9BZM6 244 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 TM9SF3Q9HD45 589 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 PRSS16Q9NQE7 514 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 KIAA1257Q9ULG3 409 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 SCML1Q9UN30 329 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 SNX11Q9Y5W9 270 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 SLCO1B1Q9Y6L6 691 aa13.58□□□□□ -0.24
HDAC6-227ENST00000485102 C10orf142B7Z368 130 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 SEMA4FO95754 770 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 ATP5BP06576 529 aaKnown RBP13.57□□□□□ -0.24
HDAC6-227ENST00000485102 HLA-EP13747 358 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 SYKP43405 635 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 MXI1P50539 228 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 ARID5BQ14865 1188 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 PKDCCQ504Y2 493 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 MSANTD2Q6P1R3 559 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 C19orf48Q6RUI8 117 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 CHST9Q7L1S5 443 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 KDM1BQ8NB78 822 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 RNF139Q8WU17 664 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 TATDN2Q93075 761 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 SCAND2PQ9GZW5 306 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-227ENST00000485102 LRRC4Q9HBW1 653 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 CNGB3Q9NQW8 809 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 GGA2Q9UJY4 613 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 BTBD3Q9Y2F9 522 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 ARID1BQ8NFD5 2236 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-227ENST00000485102 MUC22E2RYF6 1773 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-227ENST00000485102 TMEM131Q92545 1883 aa13.57□□□□□ -0.24
HDAC6-227ENST00000485102 A0A087WV48 116 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 TRABD2BA6NFA1 517 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 YJEFN3A6XGL0 299 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 E7ENQ6 273 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 TULP2O00295 520 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 IRAK2O43187 625 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 IGLV3-27P01718 113 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 PABPC1P11940 636 aaKnown RBP13.56□□□□□ -0.24
HDAC6-227ENST00000485102 CTSKP43235 329 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 CCT8P50990 548 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 KRT85P78386 507 aa13.56□□□□□ -0.24
HDAC6-227ENST00000485102 BST2Q10589 180 aaKnown RBP13.56□□□□□ -0.24
HDAC6-227ENST00000485102 TTC31Q49AM3 519 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms