RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 CCNT1O60563 726 aaKnown RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PIAS2O75928 621 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TNFRSF6BO95407 300 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 MLYCDO95822 493 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 KCNE1P15382 129 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PAMP19021 973 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CYP3A5P20815 502 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 C5AR1P21730 350 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 GLRA2P23416 452 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PLA2G5P39877 138 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TOB1P50616 345 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CLCN3P51790 818 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 GRIK3Q13003 919 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 KIZQ2M2Z5 673 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 SLC27A1Q6PCB7 646 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 IYDQ6PHW0 289 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PIK3AP1Q6ZUJ8 805 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 SPRED2Q7Z698 418 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CATSPER3Q86XQ3 398 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 HACE1Q8IYU2 909 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CCAR2Q8N163 923 aaKnown RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 GDAP1Q8TB36 358 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PIBF1Q8WXW3 757 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 LRTOMTQ8WZ04 291 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 DYDC2Q96IM9 177 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TBC1D32Q96NH3 1257 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 OSMRQ99650 979 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 NRDE2Q9H7Z3 1164 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 ZDHHC7Q9NXF8 308 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CHMP5Q9NZZ3 219 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 SEPT10Q9P0V9 454 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 KIAA1468Q9P260 1216 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TNFSF13BQ9Y275 285 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 NR2E1Q9Y466 385 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PCDHB2Q9Y5E7 798 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 KCNMB2Q9Y691 235 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 STYXL1Q9Y6J8 313 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 NOTCH4Q99466 2003 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TMCO5BA8MYB1 307 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TBC1D4O60343 1298 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PPFIA2O75334 1257 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 PLATP00750 562 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 IFNB1P01574 187 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 VTNP04004 478 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 ACPPP15309 386 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 ASMTP46597 345 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 BCAR1P56945 870 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CAPSQ13938 189 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 BOLA3Q53S33 107 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 SYCE2Q6PIF2 218 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 RSPO2Q6UXX9 243 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 UBE2R2Q712K3 238 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 URGCPQ8TCY9 931 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 STRA6Q9BX79 667 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 VN1R3Q9BXE9 311 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 FAM49AQ9H0Q0 323 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 NUP62CLQ9H1M0 184 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TTC12Q9H892 705 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 CCM2LQ9NUG4 571 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 TBC1D13Q9NVG8 400 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 KCNJ14Q9UNX9 436 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 COQ6Q9Y2Z9 468 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 DERAQ9Y315 318 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 BACE2Q9Y5Z0 518 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 OBSL1O75147 1896 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 A0A087WZ62 844 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TBKBP1A7MCY6 615 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 BTBD18B2RXH4 712 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 NT5C1B-RDH14C9J2C7 533 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 MCF2LO15068 1137 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 DCXO43602 365 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TSPAN3O60637 253 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TBCAO75347 108 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 BEST1O76090 585 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 HNRNPA1P09651 372 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 GRIA4P48058 902 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 KCNQ1P51787 676 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 RNASE9P60153 205 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ELAVL2Q12926 359 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 LETM2Q2VYF4 491 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ZACNQ401N2 412 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 SNX30Q5VWJ9 437 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 TDRD10Q5VZ19 366 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 GLB1LQ6UWU2 654 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ZPBP2Q6X784 338 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 C1orf186Q6ZWK4 172 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 MARK2Q7KZI7 788 aaKnown RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF765Q7L2R6 523 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 KRT74Q7RTS7 529 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF227Q86WZ6 799 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 SULF2Q8IWU5 870 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 UNC45BQ8IWX7 931 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 CEP170P1Q96L14 293 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 FDXACB1Q9BRP7 624 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-205ENST00000485055 YIPF2Q9BWQ6 316 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 RAB34Q9BZG1 259 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 PLEKHA4Q9H4M7 779 aa5.54□□□□□ -1.52
CCDC39-205ENST00000485055 DECR2Q9NUI1 292 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms