RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CEACAM1P13688 526 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 ENGP17813 658 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 GNA15P30679 374 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 FAM133BQ5BKY9 247 aaKnown RBP20.64■□□□□ 0.89
HPS4-213ENST00000483631 SYCP2LQ5T4T6 812 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 SERPINA13PQ6UXR4 307 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 GBP6Q6ZN66 633 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 TMPRSS6Q8IU80 811 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 SLC41A1Q8IVJ1 513 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 CADM4Q8NFZ8 388 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 DQX1Q8TE96 717 aaKnown RBP20.64■□□□□ 0.89
HPS4-213ENST00000483631 CLEC4CQ8WTT0 213 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 PRCCQ92733 491 aaPredicted RBP20.64■□□□□ 0.89
HPS4-213ENST00000483631 SIPA1Q96FS4 1042 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 SLC39A13Q96H72 371 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 MED15Q96RN5 788 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 MIS12Q9H081 205 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 ST7Q9NRC1 585 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 WSB2Q9NYS7 404 aaPredicted RBP20.64■□□□□ 0.89
HPS4-213ENST00000483631 APEX2Q9UBZ4 518 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 GGA2Q9UJY4 613 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 PLA2G4CQ9UP65 541 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 PIK3R2O00459 728 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 TSPAN3O60637 253 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 PABPC1P11940 636 aaKnown RBP20.63■□□□□ 0.89
HPS4-213ENST00000483631 GFPT1Q06210 699 aaPredicted RBP20.63■□□□□ 0.89
HPS4-213ENST00000483631 CAMK2GQ13555 558 aaPredicted RBP20.63■□□□□ 0.89
HPS4-213ENST00000483631 CAMK4Q16566 473 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 EXOC3L4Q17RC7 722 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 WDR45BQ5MNZ6 344 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 CHST9Q7L1S5 443 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 ADIPOR2Q86V24 386 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 SCUBE3Q8IX30 993 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 HJURPQ8NCD3 748 aaPredicted RBP20.63■□□□□ 0.89
HPS4-213ENST00000483631 FCRL2Q96LA5 508 aaPredicted RBP20.63■□□□□ 0.89
HPS4-213ENST00000483631 HSPA12BQ96MM6 686 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 CNTNAP3BQ96NU0 1288 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 CNTNAP3Q9BZ76 1288 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 PCED1AQ9H1Q7 454 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 TMEM245Q9H330 911 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 ANGPTL2Q9UKU9 493 aa20.63■□□□□ 0.89
HPS4-213ENST00000483631 ATXN2Q99700 1313 aaKnown RBP20.62■□□□□ 0.89
HPS4-213ENST00000483631 TYW5A2RUC4 315 aaKnown RBP20.62■□□□□ 0.89
HPS4-213ENST00000483631 LETM1O95202 739 aaPredicted RBP20.62■□□□□ 0.89
HPS4-213ENST00000483631 CALCAP01258 141 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 ATP5BP06576 529 aaKnown RBP20.62■□□□□ 0.89
HPS4-213ENST00000483631 EPHX1P07099 455 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 KCNA4P22459 653 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 PRKCHP24723 683 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 NOVA1P51513 510 aaKnown RBP20.62■□□□□ 0.89
HPS4-213ENST00000483631 COPAP53621 1224 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 PSAPL1Q6NUJ1 521 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 DENND1BQ6P3S1 775 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 IRF2BP1Q8IU81 584 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 OR2T3Q8NH03 318 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 FIBINQ8TAL6 211 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 DNASE2BQ8WZ79 361 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 SHC3Q92529 594 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 FAM149B1Q96BN6 582 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 SLC6A17Q9H1V8 727 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 THAP9Q9H5L6 903 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 POPDC2Q9HBU9 364 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 ABCB8Q9NUT2 735 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 ADAMTS9Q9P2N4 1935 aa20.62■□□□□ 0.89
HPS4-213ENST00000483631 MAP1BP46821 2468 aaKnown RBP20.62■□□□□ 0.89
HPS4-213ENST00000483631 PAPSS1O43252 624 aaPredicted RBP20.61■□□□□ 0.89
HPS4-213ENST00000483631 THAP12O43422 761 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 CFIP05156 583 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 GLI1P08151 1106 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 SYPP08247 313 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 DLDP09622 509 aaKnown RBP20.61■□□□□ 0.89
HPS4-213ENST00000483631 GNSP15586 552 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 SLC6A4P31645 630 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 TPMTP51580 245 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 ATXN3P54252 364 aaPredicted RBP20.61■□□□□ 0.89
HPS4-213ENST00000483631 ZBTB16Q05516 673 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 SH3PXD2AQ5TCZ1 1133 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 FAM114A1Q8IWE2 563 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 SORCS1Q8WY21 1168 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 TOE1Q96GM8 510 aaKnown RBP20.61■□□□□ 0.89
HPS4-213ENST00000483631 CRACR2AQ9BSW2 395 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 NUP58Q9BVL2 599 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 PCDHGC3Q9UN70 934 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 NAALADL1Q9UQQ1 740 aa20.61■□□□□ 0.89
HPS4-213ENST00000483631 BECN2A8MW95 431 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 ARHGAP33O14559 1287 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 CAPN9O14815 690 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 TBL1XO60907 577 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 IGLV3-25P01717 112 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 ACADMP11310 421 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 SLC9A1P19634 815 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 SGSHP51688 502 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 YWHAZP63104 245 aaKnown RBP20.6■□□□□ 0.89
HPS4-213ENST00000483631 PDCLQ13371 301 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 PTPRNQ16849 979 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 MBLAC2Q68D91 279 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 NADSYN1Q6IA69 706 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 RFWD3Q6PCD5 774 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 MFN1Q8IWA4 741 aa20.6■□□□□ 0.89
HPS4-213ENST00000483631 DEFB119Q8N690 84 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms