RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RNPEPQ9H4A4 650 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 COQ10BQ9H8M1 238 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 RAB6BQ9NRW1 208 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 CDC14AQ9UNH5 594 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 TRIM17Q9Y577 477 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 PTPRJQ12913 1337 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 MCF2LO15068 1137 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 DGKIO75912 1065 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 ATE1O95260 518 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SERPINE1P05121 402 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 HMOX2P30519 316 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 NPTX2P47972 431 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SOX10P56693 466 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SPP2Q13103 211 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 PIGGQ5H8A4 983 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 XKR5Q6UX68 686 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 CAND1Q86VP6 1230 aaKnown RBP12.14□□□□□ -0.47
VTI1A-205ENST00000483122 CARM1Q86X55 608 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 KIAA0319LQ8IZA0 1049 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 PLEKHA8Q96JA3 519 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SLC17A6Q9P2U8 582 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SLC9A2Q9UBY0 812 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 PRR12Q9ULL5 1215 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 MYRFQ9Y2G1 1151 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 FAM32AQ9Y421 112 aaKnown RBP12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SQORQ9Y6N5 450 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
VTI1A-205ENST00000483122 STX16-NPEPL1H3BU86 382 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TRDMT1O14717 391 aaKnown RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PPEF1O14829 653 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PLIN3O60664 434 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 GDF11O95390 407 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TNNI1P19237 187 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 OSBPP22059 807 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 FGFR3P22607 806 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PSMA2P25787 234 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 DPP6P42658 865 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 SCNN1DP51172 638 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 UGCGQ16739 394 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 SLC2A7Q6PXP3 512 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 MYO1HQ8N1T3 1032 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 MAPK15Q8TD08 544 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 BSNDQ8WZ55 320 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 BORCS5Q969J3 196 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 EME1Q96AY2 570 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TMEM79Q9BSE2 394 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 FRMD8P1Q9BZ68 369 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PRPF19Q9UMS4 504 aaKnown RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 APOC4-APOC2K7ER74 178 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 CHADO15335 359 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 LRCH4O75427 683 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 APOC2P02655 101 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 C4BPAP04003 597 aaKnown RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PRKCGP05129 697 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 CALB1P05937 261 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 CD247P20963 164 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TMED10P49755 219 aaKnown RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 C21orf59P57076 290 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 ROR1Q01973 937 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 ZACNQ401N2 412 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 IL23RQ5VWK5 629 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 DCLRE1AQ6PJP8 1040 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 GPR141Q7Z602 305 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PTAR1Q7Z6K3 402 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 USP37Q86T82 979 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 MPP5Q8N3R9 675 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 FIBCD1Q8N539 461 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 FAM156AQ8NDB6 213 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 JOSD2Q8TAC2 188 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TBC1D15Q8TC07 691 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 APBB2Q92870 758 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
VTI1A-205ENST00000483122 PCSK1NQ9UHG2 260 aa12.13□□□□□ -0.47
VTI1A-205ENST00000483122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 SLC15A5A6NIM6 579 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 FAM159BA6NKW6 160 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 SPTLC1O15269 473 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TPD52L2O43399 206 aaKnown RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 PIK3R1P27986 724 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 GABRB3P28472 473 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 ABCE1P61221 599 aaKnown RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 PDE1CQ14123 709 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-205ENST00000483122 BCL2A1Q16548 175 aa12.12□□□□□ -0.47
VTI1A-205ENST00000483122 TAZQ16635 292 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms