RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FBXO10Q9UK96 956 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 TYW5A2RUC4 315 aaKnown RBP21.68■■□□□ 1.06
SEC13-217ENST00000482647 C2CD4BA6NLJ0 364 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 CISD3P0C7P0 127 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 TFE3P19532 575 aaPredicted RBP21.68■■□□□ 1.06
SEC13-217ENST00000482647 RFC1P35251 1148 aaPredicted RBP21.68■■□□□ 1.06
SEC13-217ENST00000482647 CCR3P51677 355 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 MESP2Q0VG99 397 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 GAS6Q14393 721 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 ANGPT1Q15389 498 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 BRMS1LQ5PSV4 323 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 OTUD1Q5VV17 481 aaPredicted RBP21.68■■□□□ 1.06
SEC13-217ENST00000482647 TMC6Q7Z403 805 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 PRSS33Q8NF86 280 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 JOSD2Q8TAC2 188 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 PARVAQ9NVD7 372 aa21.68■■□□□ 1.06
SEC13-217ENST00000482647 XPO7Q9UIA9 1087 aaKnown RBP21.68■■□□□ 1.06
SEC13-217ENST00000482647 ARIH1Q9Y4X5 557 aaPredicted RBP21.68■■□□□ 1.06
SEC13-217ENST00000482647 TCRBV5S1A1TA0A578 114 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 TRIM24O15164 1050 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 GJB6O95452 261 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 PLEKP08567 350 aaPredicted RBP21.67■■□□□ 1.06
SEC13-217ENST00000482647 RDXP35241 583 aaKnown RBP21.67■■□□□ 1.06
SEC13-217ENST00000482647 CXCL12P48061 93 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 PTPN5P54829 565 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 ATP11AP98196 1134 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 ARID5BQ14865 1188 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 CCDC14Q49A88 953 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 MS4A13Q5J8X5 152 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 RAP1GAP2Q684P5 730 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 DCUN1D2Q6PH85 259 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 TERB1Q8NA31 727 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 HJURPQ8NCD3 748 aaPredicted RBP21.67■■□□□ 1.06
SEC13-217ENST00000482647 TRIM11Q96F44 468 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 ADAM33Q9BZ11 813 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 TKTL2Q9H0I9 626 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 ARHGAP20Q9P2F6 1191 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 SLC27A6Q9Y2P4 619 aa21.67■■□□□ 1.06
SEC13-217ENST00000482647 CHURC1-FNTBB4DL54 471 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 AKR1B15C9JRZ8 316 aaPredicted RBP21.66■■□□□ 1.06
SEC13-217ENST00000482647 TBL1XO60907 577 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 MFAP3LO75121 409 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 ENDOD1O94919 500 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 MYBL1P10243 752 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 TACR2P21452 398 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 GPD1P21695 349 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 HOXD9P28356 352 aaPredicted RBP21.66■■□□□ 1.06
SEC13-217ENST00000482647 PTPN9P43378 593 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 ZNF75DP51815 510 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 SEC13P55735 322 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 TBX2Q13207 712 aaPredicted RBP21.66■■□□□ 1.06
SEC13-217ENST00000482647 MAMLD1Q13495 774 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 PPP1R15BQ5SWA1 713 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 WDR59Q6PJI9 974 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 BNIPLQ7Z465 357 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 CHSY1Q86X52 802 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 CNGA4Q8IV77 575 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 LGI2Q8N0V4 545 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 ZNF557Q8N988 423 aaPredicted RBP21.66■■□□□ 1.06
SEC13-217ENST00000482647 KCNV2Q8TDN2 545 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 MRFAP1L1Q96HT8 127 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 ISCUQ9H1K1 167 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 ABHD10Q9NUJ1 306 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 ARHGEF38Q9NXL2 777 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 RAPGEFL1Q9UHV5 662 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 FBXO4Q9UKT5 387 aa21.66■■□□□ 1.06
SEC13-217ENST00000482647 KMT2EQ8IZD2 1858 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 F5H5T6 163 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 PAGE1O75459 146 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 ADCY5O95622 1261 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 EIF4A3P38919 411 aaKnown RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 ZNF143P52747 638 aaPredicted RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 ADKP55263 362 aaKnown RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 MRPS21P82921 87 aaKnown RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 TCF15Q12870 199 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 C2orf27AQ580R0 203 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 C10orf76Q5T2E6 689 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 ACBD5Q5T8D3 534 aaPredicted RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 PLEKHA7Q6IQ23 1121 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 CCDC117Q8IWD4 279 aaPredicted RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 SFTPA1Q8IWL2 248 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 RPLP0P6Q8NHW5 317 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 USP33Q8TEY7 942 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 MCEEQ96PE7 176 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 PRMT1Q99873 361 aaKnown RBP21.65■■□□□ 1.06
SEC13-217ENST00000482647 STARD13Q9Y3M8 1113 aa21.65■■□□□ 1.06
SEC13-217ENST00000482647 A0A087X0T9 212 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 H0Y858 1186 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 FAM228BP0C875 321 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 DESP17661 470 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 SGSHP51688 502 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 CSTF1Q05048 431 aaKnown RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 AUHQ13825 339 aaKnown RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 CDO1Q16878 200 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 C15orf59Q2T9L4 293 aaPredicted RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 RABGAP1LQ5R372 815 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 STRADAQ7RTN6 431 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 DNAAF5Q86Y56 855 aa21.64■■□□□ 1.05
SEC13-217ENST00000482647 MAML2Q8IZL2 1156 aaPredicted RBP21.64■■□□□ 1.05
SEC13-217ENST00000482647 CENPIQ92674 756 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms