RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TRIM24O15164 1050 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 HOXC11O43248 304 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 ACSL4O60488 711 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 TBL1XO60907 577 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 TULP3O75386 442 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 KAT7O95251 611 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 GJB6O95452 261 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 CYP1A1P04798 512 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 CALB1P05937 261 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 ABCB4P21439 1286 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 NOS2P35228 1153 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 GABRB2P47870 512 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 DGKGP49619 791 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 SATB1Q01826 763 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 DEUP1Q05D60 604 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 CCINQ13939 588 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 PPP2R5DQ14738 602 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 CDO1Q16878 200 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 PREPLQ4J6C6 727 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 C10orf76Q5T2E6 689 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 RAP1GAP2Q684P5 730 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 HEATR6Q6AI08 1181 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 DNAJC24Q6P3W2 148 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 TSSK4Q6SA08 328 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 CCDC117Q8IWD4 279 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 SFTPA1Q8IWL2 248 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 CCDC33Q8N5R6 958 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 EMC1Q8N766 993 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 RPLP0P6Q8NHW5 317 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 TMA16Q96EY4 203 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 FCRL2Q96LA5 508 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 SLC2A13Q96QE2 648 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 TBCBQ99426 244 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 DDX50Q9BQ39 737 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 SELENOOQ9BVL4 669 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 ZDHHC4Q9NPG8 344 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 SLC8A2Q9UPR5 921 aa10.38□□□□□ -0.75
SPTLC1-206ENST00000482632 ANKRD62A6NC57 917 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CASP14P31944 242 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CCR1P32246 355 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 PBX1P40424 430 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 EIF2DP41214 584 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 GRIA2P42262 883 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 MATKP42679 507 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CXCL12P48061 93 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CCR3P51677 355 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 ZBED6P86452 979 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 ATP11AP98196 1134 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CENPCQ03188 943 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 RING1Q06587 406 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 MESP2Q0VG99 397 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 TCF15Q12870 199 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 NNTQ13423 1086 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 FZD5Q13467 585 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 FBXO43Q4G163 708 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 MPPE1Q53F39 396 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 ADGRF1Q5T601 910 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 E4F1Q66K89 784 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 PKN3Q6P5Z2 889 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 IRF2BP2Q7Z5L9 587 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 VPS36Q86VN1 386 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 LGI2Q8N0V4 545 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CPXM2Q8N436 756 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 IQCDQ96DY2 449 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 ERLEC1Q96DZ1 483 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 CFAP57Q96MR6 1250 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 EDEM3Q9BZQ6 932 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 TTYH3Q9C0H2 523 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 SIK2Q9H0K1 926 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 NUCKS1Q9H1E3 243 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 KCNH6Q9H252 994 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 POLR3BQ9NW08 1133 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 RRN3Q9NYV6 651 aa10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 XPO7Q9UIA9 1087 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-206ENST00000482632 A0A1W2PQJ5 194 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 F5H5T6 163 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 CACNG3O60359 315 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 ATG13O75143 517 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 KLF8O95600 359 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 LATS1O95835 1130 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 IGLV3-27P01718 113 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 GYPCP04921 128 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 SLC2A3P11169 496 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 UNGP13051 313 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 PDGFRAP16234 1089 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 DESP17661 470 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 TFE3P19532 575 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 TACR2P21452 398 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 MMP8P22894 467 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 SLC6A4P31645 630 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 FLT3P36888 993 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 SCNN1AP37088 669 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 GGCXP38435 758 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 WASP42768 502 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 SGSHP51688 502 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 TRIM14Q14142 442 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 GAS6Q14393 721 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
SPTLC1-206ENST00000482632 FIGNQ5HY92 759 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms