RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TAS2R50P59544 299 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 TLE3Q04726 772 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 PDCLQ13371 301 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 TBRG1Q3YBR2 411 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 AWAT1Q58HT5 328 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 AKNAD1Q5T1N1 836 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 RASGRP2Q7LDG7 609 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 LAS2Q8IYD9 372 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 SLC2A12Q8TD20 617 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 HERVK_113Q902F9 699 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 AKAP1Q92667 903 aaKnown RBP eCLIP6.45□□□□□ -1.38
SF3B1-210ENST00000482158 GOLGA1Q92805 767 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 CHFRQ96EP1 664 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 PYM1Q9BRP8 204 aaKnown RBP6.45□□□□□ -1.38
SF3B1-210ENST00000482158 CHODLQ9H9P2 273 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 TFCP2L1Q9NZI6 479 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 PCDHA10Q9Y5I2 948 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-210ENST00000482158 TISP43B9A030 160 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 TFRCP02786 760 aaKnown RBP6.44□□□□□ -1.38
SF3B1-210ENST00000482158 PYGLP06737 847 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 IGFBP2P18065 325 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 RXRAP19793 462 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 GPD1P21695 349 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 GRK5P34947 590 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 STAT6P42226 847 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 SLC14A1Q13336 389 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 CBFBQ13951 182 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 LRRC24Q50LG9 513 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 ANKRD45Q5TZF3 282 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 KIAA1324Q6UXG2 1013 aaKnown RBP6.44□□□□□ -1.38
SF3B1-210ENST00000482158 DCDC5Q6ZRR9 648 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 ARHGEF25Q86VW2 580 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 ASB12Q8WXK4 309 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 RITA1Q96K30 269 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 HERC2P3Q9BVR0 1158 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 ADGRE3Q9BY15 652 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 RNF26Q9BY78 433 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-210ENST00000482158 RIC8AQ9NPQ8 531 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 PGAP2Q9UHJ9 254 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 B3GNT3Q9Y2A9 372 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 AOX1Q06278 1338 aa6.44□□□□□ -1.38
SF3B1-210ENST00000482158 CYP3A7-CYP3A51PA0A087WV96 503 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 LRRC3CA6NJW4 275 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 BTBD19C9JJ37 291 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
SF3B1-210ENST00000482158 CYP3A7P24462 503 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 NDUFS1P28331 727 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 TFF2Q03403 129 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 RNASELQ05823 741 aaKnown RBP6.43□□□□□ -1.38
SF3B1-210ENST00000482158 KCNB1Q14721 858 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 PROSER3Q2NL68 480 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 WDR93Q6P2C0 686 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 LRRTM4Q86VH4 590 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 ADAMTS18Q8TE60 1221 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 KTI12Q96EK9 354 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-210ENST00000482158 COG8Q96MW5 612 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 GATA5Q9BWX5 397 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-210ENST00000482158 PLEKHA2Q9HB19 425 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 RASSF1Q9NS23 344 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 INSL6Q9Y581 213 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 WNT6Q9Y6F9 365 aa6.43□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3DA0A087WVF3 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3IA0A087WXS9 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3EA0A087X179 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3KA0A087X1G2 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3BA6NDS4 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3FA6NER0 549 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-210ENST00000482158 RRN3P2A6NIE6 340 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3LB9A6J9 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 EYA2O00167 538 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3HP0C7X1 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 HOXD12P35452 270 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 PAPOLAP51003 745 aaKnown RBP6.42□□□□□ -1.38
SF3B1-210ENST00000482158 ZNF84P51523 738 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 CCR5P51681 352 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 RBM5P52756 815 aaKnown RBP eCLIP6.42□□□□□ -1.38
SF3B1-210ENST00000482158 RCAN1P53805 252 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 ALFQ53S48 1182 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 ZNF484Q5JVG2 852 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3GQ6DHY5 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3CQ6IPX1 549 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TMEM65Q6PI78 240 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 CHSY1Q86X52 802 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TBC1D3Q8IZP1 549 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-210ENST00000482158 CCDC17Q96LX7 622 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 HS6ST2Q96MM7 605 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 TWNKQ96RR1 684 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 NPAS1Q99742 590 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 RMI1Q9H9A7 625 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 PDP2Q9P2J9 529 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 DERAQ9Y315 318 aa6.42□□□□□ -1.38
SF3B1-210ENST00000482158 COPG1Q9Y678 874 aaKnown RBP6.42□□□□□ -1.38
SF3B1-210ENST00000482158 POC1B-GALNT4F8VUJ3 575 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 STX16-NPEPL1H3BU86 382 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 STX16O14662 325 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 IGLV2-14P01704 120 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 POLBP06746 335 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 CNTFP26441 200 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 TGFB2P61812 414 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms