RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ACSF2Q96CM8 615 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 ASB16Q96NS5 453 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 RAB6CQ9H0N0 254 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 WDCPQ9H6R7 721 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 FAM53CQ9NYF3 392 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 ARHGAP26Q9UNA1 814 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 HBS1LQ9Y450 684 aaKnown RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 DENND4AQ7Z401 1863 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 IRF1P10914 325 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 CCR1P32246 355 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 KCNQ1P51787 676 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 NNTQ13423 1086 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 EIF4EBP2Q13542 120 aaPredicted RBP12.02□□□□□ -0.49
HPS4-212ENST00000481910 SMAD2Q15796 467 aaKnown RBP12.02□□□□□ -0.49
HPS4-212ENST00000481910 DAB2IPQ5VWQ8 1189 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 BNIPLQ7Z465 357 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 FAM131BQ86XD5 332 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 ARFGAP1Q8N6T3 406 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 NIPA2Q8N8Q9 360 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 ZFRQ96KR1 1074 aaKnown RBP12.02□□□□□ -0.49
HPS4-212ENST00000481910 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
HPS4-212ENST00000481910 FAM50BQ9Y247 325 aa12.02□□□□□ -0.49
HPS4-212ENST00000481910 ZFP37Q9Y6Q3 630 aaPredicted RBP12.02□□□□□ -0.49
HPS4-212ENST00000481910 CTIFO43310 598 aaKnown RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 LRCH4O75427 683 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 STC2O76061 302 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PRAMEF12O95522 483 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 SLC2A3P11169 496 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 WEE1P30291 646 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 HARS2P49590 506 aaKnown RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 CXCR3P49682 368 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 RING1Q06587 406 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 CC2D1AQ6P1N0 951 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 UNC45BQ8IWX7 931 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 CELF5Q8N6W0 485 aaKnown RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 ST13P5Q8NFI4 369 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 SH3RF2Q8TEC5 729 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PLD4Q96BZ4 506 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 SLC39A13Q96H72 371 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PHF7Q9BWX1 381 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 GOLPH3Q9H4A6 298 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 ZFP14Q9HCL3 533 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 CFAP97Q9P2B7 532 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PCSK1NQ9UHG2 260 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 ALG6Q9Y672 507 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 GOLGA6L9A6NEM1 432 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 LEFTY2O00292 366 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 TIMM44O43615 452 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PEX14O75381 377 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PALMO75781 387 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 IGLV3-27P01718 113 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 APOEP02649 317 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 COMTP21964 271 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 MIPP30301 263 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 MAN1A1P33908 653 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 VIPR2P41587 438 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 SLC1A1P43005 524 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 CCDC15Q0P6D6 951 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 PPP2R5DQ14738 602 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 AAK1Q2M2I8 961 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 NUGGCQ68CJ6 796 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 C11orf63Q6NUN7 778 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 LEKR1Q6ZMV7 388 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 DDX42Q86XP3 938 aaKnown RBP eCLIP12.01□□□□□ -0.49
HPS4-212ENST00000481910 SYCE1Q8N0S2 351 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 C17orf53Q8N3J3 647 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 ADAMTS19Q8TE59 1207 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 RPGRIP1Q96KN7 1286 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 FCRL2Q96LA5 508 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 IRX2Q9BZI1 471 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 TRPV5Q9NQA5 729 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 THEGQ9P2T0 379 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 SLC12A6Q9UHW9 1150 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 NR2E1Q9Y466 385 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 HYOU1Q9Y4L1 999 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 CAPN6Q9Y6Q1 641 aa12.01□□□□□ -0.49
HPS4-212ENST00000481910 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
HPS4-212ENST00000481910 SPOPO43791 374 aa12□□□□□ -0.49
HPS4-212ENST00000481910 PRPSAP2O60256 369 aa12□□□□□ -0.49
HPS4-212ENST00000481910 ECEL1O95672 775 aa12□□□□□ -0.49
HPS4-212ENST00000481910 MOCS2O96007 188 aaPredicted RBP12□□□□□ -0.49
HPS4-212ENST00000481910 IL9P15248 144 aa12□□□□□ -0.49
HPS4-212ENST00000481910 PCK1P35558 622 aa12□□□□□ -0.49
HPS4-212ENST00000481910 HADHQ16836 314 aaKnown RBP12□□□□□ -0.49
HPS4-212ENST00000481910 ARL13BQ3SXY8 428 aa12□□□□□ -0.49
HPS4-212ENST00000481910 BRMS1LQ5PSV4 323 aa12□□□□□ -0.49
HPS4-212ENST00000481910 CPNE8Q86YQ8 564 aa12□□□□□ -0.49
HPS4-212ENST00000481910 DENND1CQ8IV53 801 aa12□□□□□ -0.49
HPS4-212ENST00000481910 LRRC57Q8N9N7 239 aa12□□□□□ -0.49
HPS4-212ENST00000481910 TDRD5Q8NAT2 981 aaKnown RBP12□□□□□ -0.49
HPS4-212ENST00000481910 WBP2Q969T9 261 aa12□□□□□ -0.49
HPS4-212ENST00000481910 ALS2CR12Q96Q35 445 aa12□□□□□ -0.49
HPS4-212ENST00000481910 TKTL2Q9H0I9 626 aa12□□□□□ -0.49
HPS4-212ENST00000481910 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
HPS4-212ENST00000481910 TRPV4Q9HBA0 871 aa12□□□□□ -0.49
HPS4-212ENST00000481910 KCND1Q9NSA2 647 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms