RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 TBC1D3LB9A6J9 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 BTBD19C9JJ37 291 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 H0Y3Z8 333 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 INO80B-WBP1J3KQ70 363 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 SMIM22K7EJ46 135 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 CLIC1O00299 241 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 FYB1O15117 783 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 NKX2-8O15522 239 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3HP0C7X1 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 SLC8A1P32418 973 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 GRK5P34947 590 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 ADD2P35612 726 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 PAPOLAP51003 745 aaKnown RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 PRKAA2P54646 552 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 WDR5P61964 334 aaKnown RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 CUL4BQ13620 913 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 CNGA3Q16281 694 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TAF12Q16514 161 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBRG1Q3YBR2 411 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 CERKLQ49MI3 558 aaPredicted RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 CC2D1BQ5T0F9 858 aaKnown RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 TTC22Q5TAA0 569 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3GQ6DHY5 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3CQ6IPX1 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 WDR93Q6P2C0 686 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 C16orf89Q6UX73 402 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 MOGAT3Q86VF5 341 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 C2CD5Q86YS7 1000 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 FTSJ3Q8IY81 847 aaKnown RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 C16orf71Q8IYS4 520 aaPredicted RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3Q8IZP1 549 aaPredicted RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 LINC01465Q8N7H1 131 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 AFG1LQ8WV93 481 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 AKAP1Q92667 903 aaKnown RBP eCLIP4.32□□□□□ -1.72
CBX3-207ENST00000481300 HIC2Q96JB3 615 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 MECRQ9BV79 373 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 RNF26Q9BY78 433 aaPredicted RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 CDCP1Q9H5V8 836 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 ADAM21Q9UKJ8 722 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 RAB21Q9UL25 225 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TRPC5Q9UL62 973 aaPredicted RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 UNC13AQ9UPW8 1703 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 SMARCA2P51531 1590 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 LOC105369274A0A096LPK9 316 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 LOC102723532A0A0G2JNH3 316 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 LRRC3CA6NJW4 275 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 SLC38A8A6NNN8 435 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 POC1B-GALNT4F8VUJ3 575 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 M0QYT0 321 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 M0QZQ0 153 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 RBMXL2O75526 392 aaKnown RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 FAM155BO75949 473 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 KRT38O76015 456 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 ALDOAP04075 364 aaKnown RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 MAPK9P45984 424 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 CDK7P50613 346 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 RBM6P78332 1123 aaKnown RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 NHLH1Q02575 133 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 LARS2Q15031 903 aaKnown RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 OR4N4Q8N0Y3 316 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 GALNT4Q8N4A0 578 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 SRFBP1Q8NEF9 429 aaKnown RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 SPPL3Q8TCT6 385 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 CSGALNACT1Q8TDX6 532 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 REPS1Q96D71 796 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 PYM1Q9BRP8 204 aaKnown RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 TMLHEQ9NVH6 421 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 ASIC5Q9NY37 505 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 ARPP21Q9UBL0 812 aaPredicted RBP4.31□□□□□ -1.72
CBX3-207ENST00000481300 MAFFQ9ULX9 164 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 SLC12A4Q9UP95 1085 aa4.31□□□□□ -1.72
CBX3-207ENST00000481300 CCDC189A1A4V9 331 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 MBD3L5A6NJ08 208 aaPredicted RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 C3orf70A6NLC5 250 aaPredicted RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 TMEM232C9JQI7 657 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 E7EVH7 732 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 H3BNC9 293 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 MBPP02686 304 aaPredicted RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 CHRM5P08912 532 aaPredicted RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 PCP4P48539 62 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 MCM2P49736 904 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 VPS41P49754 854 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 RBM5P52756 815 aaKnown RBP eCLIP4.3□□□□□ -1.72
CBX3-207ENST00000481300 ACTR2P61160 394 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 RPL15P61313 204 aaKnown RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 TLE3Q04726 772 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 PFKFB3Q16875 520 aaPredicted RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 FBXO47Q5MNV8 452 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 PRAMEF17Q5VTA0 474 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 FCRLBQ6BAA4 426 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 SYT13Q7L8C5 426 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 SUGP1Q8IWZ8 645 aaKnown RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 PNLDC1Q8NA58 520 aaKnown RBP4.3□□□□□ -1.72
CBX3-207ENST00000481300 SDCCAG3Q96C92 435 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 ELOVL1Q9BW60 279 aa4.3□□□□□ -1.72
CBX3-207ENST00000481300 TRIM2Q9C040 744 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms