RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 RNF168Q8IYW5 571 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 GALNT16Q8N428 558 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 LRRC71Q8N4P6 559 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 TEX9Q8N6V9 391 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 C8orf58Q8NAV2 365 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 LSM14AQ8ND56 463 aaKnown RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 FAM46DQ8NEK8 389 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PLBD2Q8NHP8 589 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 RITA1Q96K30 269 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 NAP1L3Q99457 506 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PAGR1Q9BTK6 254 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 TTYH3Q9C0H2 523 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 OSBPL5Q9H0X9 879 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PRDM16Q9HAZ2 1276 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 DUSP22Q9NRW4 184 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PDRG1Q9NUG6 133 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 IRAK4Q9NWZ3 460 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 TRNAU1APQ9NX07 287 aaKnown RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 TUBA8Q9NY65 449 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 VPS18Q9P253 973 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 STAP2Q9UGK3 403 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 CPA4Q9UI42 421 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PCDHA6Q9UN73 950 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 SOS1Q07889 1333 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ADGRL3Q9HAR2 1447 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 SHANK2Q9UPX8 1470 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 H3BNC9 293 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ADAM10O14672 748 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 APAF1O14727 1248 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 DCLK1O15075 740 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 CEP104O60308 925 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 THP07101 528 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 IFIT2P09913 472 aaKnown RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 SNHG28P0DPA3 235 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 FERP16591 822 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PAX7P23759 505 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 SLC7A1P30825 629 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PDE1AP54750 535 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 SOX8P57073 446 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PPFIA1Q13136 1202 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 UBE4AQ14139 1066 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 GALEQ14376 348 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 DAZAP2Q15038 168 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 TAF7Q15545 349 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 STX1AQ16623 288 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 AMOTQ4VCS5 1084 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 LRRC23Q53EV4 343 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 NUGGCQ68CJ6 796 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 MIS18BP1Q6P0N0 1132 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 RBM43Q6ZSC3 357 aaKnown RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 SEPT14Q6ZU15 432 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 USP37Q86T82 979 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PPP1R3BQ86XI6 285 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 CEP57L1Q8IYX8 460 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 SAMD14Q8IZD0 417 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 KRT78Q8N1N4 520 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 NANOGP1Q8N7R0 232 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 OR6B3Q8NGW1 331 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ZFAND2BQ8WV99 257 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 KBTBD7Q8WVZ9 684 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 R3HDM4Q96D70 268 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 HMCESQ96FZ2 354 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 APIPQ96GX9 242 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ZC3H10Q96K80 434 aaKnown RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ASB2Q96Q27 587 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 JPH2Q9BR39 696 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 TRIM7Q9C029 511 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 LRRCC1Q9C099 1032 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 BTBD1Q9H0C5 482 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ZMAT3Q9HA38 289 aaKnown RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ZNF287Q9HBT7 754 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ZBTB40Q9NUA8 1239 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 ANO10Q9NW15 660 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 RGL1Q9NZL6 768 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 OGDHLQ9ULD0 1010 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 TRPM1Q7Z4N2 1603 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PRAG1Q86YV5 1406 aa4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PRG4Q92954 1404 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-204ENST00000479555 PZPP20742 1482 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ABCC10Q5T3U5 1492 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 KIAA0586Q9BVV6 1533 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ERICH2A1L162 156 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC69A6NI79 296 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 GOLGA8KD6RF30 607 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 STX6O43752 255 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 SHOX2O60902 331 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 HMMRO75330 724 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 RTN3O95197 1032 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 MAP4K4O95819 1239 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 AHSGP02765 367 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 KITP10721 976 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 BRAFP15056 766 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 HSPA4P34932 840 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 AMPHP49418 695 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 AARSP49588 968 aaKnown RBP eCLIP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 EVCP57679 992 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms