RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MYO1CO00159 1063 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PER2O15055 1255 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CYP26A1O43174 497 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 MED7O43513 233 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 TGM5O43548 720 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CLASP2O75122 1294 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 LRG1P02750 347 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 F13BP05160 661 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PAEPP09466 180 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PDGFRBP09619 1106 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 UCHL3P15374 230 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PTPN1P18031 435 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 RPL17P18621 184 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 IGFBP6P24592 240 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ACAT1P24752 427 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ANXA13P27216 316 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ALDH1A3P47895 512 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 TUFMP49411 452 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CLCN4P51793 760 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 NDST1P52848 882 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CDH8P55286 799 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 BPIFB4P59827 614 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 RPL10AP62906 217 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ROR1Q01973 937 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CYP27A1Q02318 531 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ADCY1Q08828 1119 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 IFRD2Q12894 506 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 GPR17Q13304 367 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CAMK1Q14012 370 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 TRIM14Q14142 442 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 SLBPQ14493 270 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 STILQ15468 1287 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 TAF12Q16514 161 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 SGO2Q562F6 1265 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 MDH1BQ5I0G3 518 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PPM1LQ5SGD2 360 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 KLHDC7AQ5VTJ3 777 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PRAMEF13Q5VWM6 474 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 VHLLQ6RSH7 139 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 LIMS2Q7Z4I7 341 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ADGRD2Q7Z7M1 963 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 SRLQ86TD4 932 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 OSTM1Q86WC4 334 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PALB2Q86YC2 1186 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ARHGEF19Q8IW93 802 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 EFHBQ8N7U6 833 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 B3GALNT2Q8NCR0 500 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 ZNF461Q8TAF7 563 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 LMO3Q8TAP4 145 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 MYCBPAPQ8TBZ2 947 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 KBTBD7Q8WVZ9 684 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 TMEM176AQ96HP8 235 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 FUBP3Q96I24 572 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 HEXIM2Q96MH2 286 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CLSTN3Q9BQT9 956 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 UBXN6Q9BZV1 441 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 TRIM5Q9C035 493 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 CYP4F11Q9HBI6 524 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 MAN1C1Q9NR34 630 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 FAM207AQ9NSI2 230 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 HESX1Q9UBX0 185 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 AFF4Q9UHB7 1163 aaKnown RBP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 DNAJC12Q9UKB3 198 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 KIAA1257Q9ULG3 409 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
SF3B1-209ENST00000479532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF3B1-209ENST00000479532 MYH10P35580 1976 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MYO9BQ13459 2157 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 WDR27A2RRH5 827 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MTMR11A4FU01 709 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 TMCO5BA8MYB1 307 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 TEX33O43247 280 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 TBC1D4O60343 1298 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 LRRN2O75325 713 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 HNRNPA1P09651 372 aaKnown RBP eCLIP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 OR4Q2P0C623 313 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 VDRP11473 427 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 ATF2P15336 505 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CD19P15391 556 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 HOXB8P17481 243 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 RAB6AP20340 208 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 LMO2P25791 158 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MAP4P27816 1152 aaKnown RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 BUD31P41223 144 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 STAT1P42224 750 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 POLR2FP61218 127 aaKnown RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 PSMC1P62191 440 aaKnown RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 NR1I3Q14994 352 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 VEPH1Q14D04 833 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MGAT5BQ3V5L5 792 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 TTC31Q49AM3 519 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MRM1Q6IN84 353 aaKnown RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 IQCEQ6IPM2 695 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CES5AQ6NT32 575 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 FAM171BQ6P995 826 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 SARM1Q6SZW1 724 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 TMEM270Q6UE05 265 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CYP26C1Q6V0L0 522 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 APTXQ7Z2E3 356 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms