RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 KCTD21Q4G0X4 260 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 BRDTQ58F21 947 aaPredicted RBP13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 PPP1R18Q6NYC8 613 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 DRICH1Q6PGQ1 229 aaPredicted RBP13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 CRLF3Q8IUI8 442 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 FBXW8Q8N3Y1 598 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 COPS5Q92905 334 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 NSMCE3Q96MG7 304 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 MTG1Q9BT17 334 aaPredicted RBP13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 TMEM260Q9NX78 707 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 SNX9Q9Y5X1 595 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 SCINQ9Y6U3 715 aa13.54□□□□□ -0.24
CNKSR3-204ENST00000479339 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 K7EPI3 171 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 MGEA5O60502 916 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 FAM155BO75949 473 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 BMP10O95393 424 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 CAPNS1P04632 268 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 NR3C2P08235 984 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 GAP43P17677 238 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 PSMC3P17980 439 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 POLR2EP19388 210 aaKnown RBP13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 ALDH18A1P54886 795 aaKnown RBP13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 METTL21CQ5VZV1 264 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 KSR1Q8IVT5 923 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 PEX5LQ8IYB4 626 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 HAS1Q92839 578 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 CCDC138Q96M89 665 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 FAM111AQ96PZ2 611 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 PAIP1Q9H074 479 aaKnown RBP13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 OLFML3Q9NRN5 406 aa13.53□□□□□ -0.24
CNKSR3-204ENST00000479339 POTEB3A0JP26 581 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 MEI4A8MW99 385 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 EIF3FO00303 357 aaPredicted RBP13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 PSTPIP1O43586 416 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 MYL3P08590 195 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 TRPC1P48995 793 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 EPHB1P54762 984 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 PSMC6P62333 389 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 ESRRGP62508 458 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 SLC25A3Q00325 362 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 CETN1Q12798 172 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 FASTKD3Q14CZ7 662 aaKnown RBP13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 POTEBQ6S5H4 581 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 PCGF5Q86SE9 256 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 GPR180Q86V85 440 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 ARID3BQ8IVW6 561 aaPredicted RBP13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 PPM1KQ8N3J5 372 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 APBB2Q92870 758 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 PDCD2LQ9BRP1 358 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 HIPK3Q9H422 1215 aa13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.24
CNKSR3-204ENST00000479339 DNAH12Q6ZR08 3092 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 TMEM114B3SHH9 223 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 E5RJQ4 531 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 PFDN6O15212 129 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 SULT1C4O75897 302 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 H6PDO95479 791 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 MYL4P12829 197 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 SLC5A3P53794 718 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 AQP5P55064 265 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 RGS21Q2M5E4 152 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 HSF5Q4G112 596 aaPredicted RBP13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 CBWD6Q4V339 395 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 CBWD3Q5JTY5 395 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 CBWD5Q5RIA9 395 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 SPOPLQ6IQ16 392 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 C16orf87Q6PH81 154 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 ZNF420Q8TAQ5 688 aaPredicted RBP13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 CMTM5Q96DZ9 223 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 BTBD6Q96KE9 485 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 RILPQ96NA2 401 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 NOCTQ9UK39 431 aaKnown RBP13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 FRMD4BQ9Y2L6 1034 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 SPO11Q9Y5K1 396 aa13.52□□□□□ -0.25
CNKSR3-204ENST00000479339 EDIL3O43854 480 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 KDM1AO60341 852 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 SIN3BO75182 1162 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 ZBTB11O95625 1053 aaPredicted RBP13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 PABPC1P11940 636 aaKnown RBP13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 TTKP33981 857 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 GPX6P59796 221 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 TXNL4AP83876 142 aaKnown RBP13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 ARHGAP1Q07960 439 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 PPIGQ13427 754 aaKnown RBP eCLIP13.51□□□□□ -0.254e-7■■□□□ 12.6
CNKSR3-204ENST00000479339 PSMD6Q15008 389 aa13.51□□□□□ -0.25
CNKSR3-204ENST00000479339 HIF1AQ16665 826 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms