RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 NTN5Q8WTR8 489 aaPredicted RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 CPT1BQ92523 772 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 RUBCNQ92622 972 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 C3orf49Q96BT1 292 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 SENP7Q9BQF6 1050 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 HERPUD2Q9BSE4 406 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 MECRQ9BV79 373 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TMEM120AQ9BXJ8 343 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TRIM2Q9C040 744 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 VPS16Q9H269 839 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 ELAC1Q9H777 363 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 LIN7CQ9NUP9 197 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 BCCIPQ9P287 314 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TRPC5Q9UL62 973 aaPredicted RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 DAPP1Q9UN19 280 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 C19orf53Q9UNZ5 99 aaPredicted RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 SLC12A4Q9UP95 1085 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 MORC2Q9Y6X9 1032 aaPredicted RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 WDR17Q8IZU2 1322 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3IA0A087WXS9 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3FA6NER0 549 aaPredicted RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 C3orf70A6NLC5 250 aaPredicted RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 SLC38A8A6NNN8 435 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 IPO5O00410 1097 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 PPP6CO00743 305 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 EIF3JO75822 258 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 FBLP22087 321 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 MPGP29372 298 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 GRK5P34947 590 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 HALP42357 657 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 CDK7P50613 346 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 PNLIPRP1P54315 467 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 RBM6P78332 1123 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TLE3Q04726 772 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 SRSF4Q08170 494 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBRG1Q3YBR2 411 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 CEP78Q5JTW2 689 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3GQ6DHY5 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 JMJD6Q6NYC1 403 aaPredicted RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 LAS2Q8IYD9 372 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 GALNT15Q8N3T1 639 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 NKAPQ8N5F7 415 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 ASB12Q8WXK4 309 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 DDB2Q92466 427 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TRIM63Q969Q1 353 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TRMT61AQ96FX7 289 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 ZNF845Q96IR2 970 aaPredicted RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 TRAPPC9Q96Q05 1148 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 FAM118BQ9BPY3 351 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 SAYSD1Q9NPB0 183 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 ADARB2Q9NS39 739 aaKnown RBP4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 RAB21Q9UL25 225 aa4.45□□□□□ -1.7
SMARCA1-204ENST00000478420 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 C16orf96A6NNT2 1141 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 DSCR3O14972 297 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 USP12O75317 370 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 ALDOAP04075 364 aaKnown RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 ENO1P06733 434 aaKnown RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 CYP3A4P08684 503 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 SFPQP23246 707 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 CST5P28325 142 aaPredicted RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 EPHB2P29323 1055 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 SERPINA4P29622 427 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 STAT6P42226 847 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 C21orf58P58505 322 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 TAS2R50P59544 299 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 POSTNQ15063 836 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 SEC23BQ15437 767 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 TTC22Q5TAA0 569 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 ANO7Q6IWH7 933 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 SLC39A5Q6ZMH5 540 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 RFX8Q6ZV50 586 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 UEVLDQ8IX04 471 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 SMC5Q8IY18 1101 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 ANKRD42Q8N9B4 389 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 ADPRHL1Q8NDY3 354 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 CELF1Q92879 486 aaKnown RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 MAP4K1Q92918 833 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 P2RY11Q96G91 374 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 DDX23Q9BUQ8 820 aaKnown RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 TAF1DQ9H5J8 278 aaPredicted RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 PDGFCQ9NRA1 345 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 NDUFAF4Q9P032 175 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 SRP68Q9UHB9 627 aaKnown RBP4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 B3GNT3Q9Y2A9 372 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 FRMD4BQ9Y2L6 1034 aa4.44□□□□□ -1.7
SMARCA1-204ENST00000478420 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms