RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 TTC28Q96AY4 2481 aa11.91□□□□□ -0.5
CBWD3-206ENST00000478048 ENDOD1O94919 500 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 PSMC3P17980 439 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 GBP1P32455 592 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
CBWD3-206ENST00000478048 NNTQ13423 1086 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 TRIM68Q6AZZ1 485 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 HTR3DQ70Z44 454 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 KIAA1328Q86T90 577 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 FAM131BQ86XD5 332 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
CBWD3-206ENST00000478048 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 RHOT2Q8IXI1 618 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 FNIP1Q8TF40 1166 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 E2F7Q96AV8 911 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 PLD4Q96BZ4 506 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 LUC7LQ9NQ29 371 aaKnown RBP11.9□□□□□ -0.5
CBWD3-206ENST00000478048 IGSF9Q9P2J2 1179 aa11.9□□□□□ -0.5
CBWD3-206ENST00000478048 AGO1Q9UL18 857 aaKnown RBP11.9□□□□□ -0.5
CBWD3-206ENST00000478048 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 ST8SIA5O15466 376 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 PJA2O43164 708 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 NARSO43776 548 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 NRDCO43847 1150 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 AVPP01185 164 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 CD46P15529 392 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 CXCR3P49682 368 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 RING1Q06587 406 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 FCHO2Q0JRZ9 810 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 STRADAQ7RTN6 431 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 DEPDC1BQ8WUY9 529 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 RNF34Q969K3 372 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 NXPE3Q969Y0 559 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 KCNU1A8MYU2 1149 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 MYO1FO00160 1098 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 MTA2O94776 668 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 F9P00740 461 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 TCF4P15884 667 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 GDI1P31150 447 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 CCR1P32246 355 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 NOP2P46087 812 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 HARS2P49590 506 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 KPNA1P52294 538 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 VCPP55072 806 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 TNK2Q07912 1038 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 MESDQ14696 234 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 TCEAL1Q15170 157 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 NUGGCQ68CJ6 796 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 GJD3Q8N144 294 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 P2RY11Q96G91 374 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 FAM83CQ9BQN1 747 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 TRMT61BQ9BVS5 477 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 MAGEB5Q9BZ81 275 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 TKTL2Q9H0I9 626 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 EBF3Q9H4W6 596 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 WDCPQ9H6R7 721 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 DUS2Q9NX74 493 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
CBWD3-206ENST00000478048 LSM7Q9UK45 103 aaKnown RBP11.89□□□□□ -0.51
CBWD3-206ENST00000478048 F5P12259 2224 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 TRIOO75962 3097 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 A0A0A6YYK5 440 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-206ENST00000478048 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-206ENST00000478048 TMEM110-MUSTN1A8MSY1 372 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
CBWD3-206ENST00000478048 BUB1O43683 1085 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 LRCH4O75427 683 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 ARSAP15289 507 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 PPP2R5DQ14738 602 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 EML3Q32P44 896 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
CBWD3-206ENST00000478048 NADSYN1Q6IA69 706 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-206ENST00000478048 SND1Q7KZF4 910 aaKnown RBP eCLIP11.88□□□□□ -0.51
CBWD3-206ENST00000478048 UNC45BQ8IWX7 931 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 YAF2Q8IY57 180 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 ADGRG2Q8IZP9 1017 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 CCDC185Q8N715 623 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 TTC8Q8TAM2 541 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 MYEOVQ96EZ4 313 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 PEBP4Q96S96 227 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 GOLPH3Q9H4A6 298 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 HPS4Q9NQG7 708 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 PCSK1NQ9UHG2 260 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 IP6K2Q9UHH9 426 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 PYCARDQ9ULZ3 195 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 SNX10Q9Y5X0 201 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 TICRRQ7Z2Z1 1910 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 MUC3AQ02505 3323 aa11.88□□□□□ -0.51
CBWD3-206ENST00000478048 BTNL10A8MVZ5 291 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 ARNTLO00327 626 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 CHADO15335 359 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms