RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SIM2Q14190 667 aaPredicted RBP18.34■□□□□ 0.53
PTPN7-209ENST00000477554 CCDC6Q16204 474 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 RAB6CQ53S08 254 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 ADGRF1Q5T601 910 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 NAA35Q5VZE5 725 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 CFAP52Q8N1V2 620 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 TSTD1Q8NFU3 115 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 RLN3Q8WXF3 142 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 GOLGA1Q92805 767 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 EXOC4Q96A65 974 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 ACDQ96AP0 544 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 EDEM3Q9BZQ6 932 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 RAB6CQ9H0N0 254 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 ANLNQ9NQW6 1124 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 ABCA7Q8IZY2 2146 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 MUC22E2RYF6 1773 aaPredicted RBP18.34■□□□□ 0.53
PTPN7-209ENST00000477554 I6L893 689 aaPredicted RBP18.33■□□□□ 0.53
PTPN7-209ENST00000477554 CAPN9O14815 690 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 AXIN1O15169 862 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 ACSL4O60488 711 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 APBB3O95704 486 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 BCKDHBP21953 392 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 TGM1P22735 817 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 DGKEP52429 567 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 ATXN1P54253 815 aaKnown RBP18.33■□□□□ 0.53
PTPN7-209ENST00000477554 RPS24P62847 133 aaKnown RBP18.33■□□□□ 0.53
PTPN7-209ENST00000477554 NOMO3P69849 1222 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 ARID5AQ03989 594 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 CCDC173Q0VFZ6 552 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 PIK3R6Q5UE93 754 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 XYLT1Q86Y38 959 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 KIAA2013Q8IYS2 634 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 FAM160A2Q8N612 972 aaPredicted RBP18.33■□□□□ 0.53
PTPN7-209ENST00000477554 PDLIM2Q96JY6 352 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 SEMA4AQ9H3S1 761 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 TMPRSS4Q9NRS4 437 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 TLR6Q9Y2C9 796 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 STARD13Q9Y3M8 1113 aa18.33■□□□□ 0.53
PTPN7-209ENST00000477554 TBL1XO60907 577 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 CD70P32970 193 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 IRAK1P51617 712 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SLC6A3Q01959 620 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 MMS22LQ6ZRQ5 1243 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 RASSF3Q86WH2 238 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 CIR1Q86X95 450 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 CAMKK1Q8N5S9 505 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SPC24Q8NBT2 197 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SLC30A5Q8TAD4 765 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 HMGB4Q8WW32 186 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 GAB3Q8WWW8 586 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 STIM2Q9P246 746 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SNX10Q9Y5X0 201 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 A0A1W2PQJ5 194 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 TCRBV21S2A2A0A5A6 115 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 RPP40O75818 363 aaKnown RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 IL12RB1P42701 662 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 BPIFB4P59827 614 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 RING1Q06587 406 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 TBX2Q13207 712 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 FSCBQ5H9T9 825 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 E4F1Q66K89 784 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 RAP1GAP2Q684P5 730 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 BEND5Q7L4P6 421 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 CACNA2D4Q7Z3S7 1137 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 TMEM35BQ8NCS4 154 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 TMA16Q96EY4 203 aaKnown RBP18.32■□□□□ 0.52
PTPN7-209ENST00000477554 LMLNQ96KR4 655 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SERPINB11Q96P15 392 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 PDCL3Q9H2J4 239 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SMOC1Q9H4F8 434 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 EBF1Q9UH73 591 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SLC27A6Q9Y2P4 619 aa18.32■□□□□ 0.52
PTPN7-209ENST00000477554 SPAG17Q6Q759 2223 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 GOLGA8SH3BPF8 625 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 SART1O43290 800 aaKnown RBP18.31■□□□□ 0.52
PTPN7-209ENST00000477554 DAB1O75553 588 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 GABRG2P18507 467 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 FLT3P36888 993 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 GABRB2P47870 512 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 NME3Q13232 169 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 MPPE1Q53F39 396 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 NUGGCQ68CJ6 796 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 RNF43Q68DV7 783 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 CEP68Q76N32 757 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 SLC26A9Q7LBE3 791 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 ADIPOR2Q86V24 386 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 DNAAF5Q86Y56 855 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 ZNF366Q8N895 744 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 CYB5D2Q8WUJ1 264 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 RUBCNQ92622 972 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 TTYH3Q9C0H2 523 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 SYNCQ9H7C4 482 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 FAM204AQ9H8W3 233 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 PIGVQ9NUD9 493 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 ABCB8Q9NUT2 735 aa18.31■□□□□ 0.52
PTPN7-209ENST00000477554 DDIT4Q9NX09 232 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms