RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MARCKSL1P49006 195 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 ATP13A4Q4VNC1 1196 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 MS4A13Q5J8X5 152 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 ZFYVE27Q5T4F4 411 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 MEI1Q5TIA1 1274 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 PIK3R6Q5UE93 754 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 VITQ6UXI7 678 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 BBS7Q8IWZ6 715 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 KRT35Q92764 455 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 FGF14Q92915 247 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 LRRC3BQ96PB8 259 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 SIK2Q9H0K1 926 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 DHX35Q9H5Z1 703 aaKnown RBP16.76■□□□□ 0.27
VHL-203ENST00000477538 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.76■□□□□ 0.27
VHL-203ENST00000477538 HS3ST4Q9Y661 456 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 COL4A3Q01955 1670 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 SLC9A3R1O14745 358 aaPredicted RBP16.75■□□□□ 0.27
VHL-203ENST00000477538 ECI2O75521 394 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 GGCXP38435 758 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 HTR4Q13639 388 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 CA9Q16790 459 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
VHL-203ENST00000477538 ADGRF1Q5T601 910 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 RAP1GAP2Q684P5 730 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 NADSYN1Q6IA69 706 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 CHSY1Q86X52 802 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 PYROXD2Q8N2H3 581 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 UBL4BQ8N7F7 174 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 KIAA1958Q8N8K9 716 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 UBE2Q2Q8WVN8 375 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 HES6Q96HZ4 224 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
VHL-203ENST00000477538 MAGEB5Q9BZ81 275 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 PLA2G2FQ9BZM2 168 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 OSBPL2Q9H1P3 480 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 KLHL11Q9NVR0 708 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 DDX56Q9NY93 547 aaKnown RBP16.75■□□□□ 0.27
VHL-203ENST00000477538 TBC1D14Q9P2M4 693 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 STOML2Q9UJZ1 356 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 JRKLQ9Y4A0 524 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 PCDHA3Q9Y5H8 950 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 SNX10Q9Y5X0 201 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 COL4A2P08572 1712 aa16.75■□□□□ 0.27
VHL-203ENST00000477538 GOLGA6L7A0A1B0GV03 622 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 ANHXE9PGG2 379 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 DDX3YO15523 660 aaKnown RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 KRT1P04264 644 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 TACR2P21452 398 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 SLC6A4P31645 630 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 DNA2P51530 1060 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 MLLT6P55198 1093 aaPredicted RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 CDH6P55285 790 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 KRT81Q14533 505 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 RPS6KA1Q15418 735 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 DPYSL2Q16555 572 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 ODF2Q5BJF6 829 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 PPP6R3Q5H9R7 873 aaPredicted RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 ACBD5Q5T8D3 534 aaPredicted RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 NYAP1Q6ZVC0 841 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 MFSD6LQ8IWD5 586 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 FAM217AQ8IXS0 508 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 YAF2Q8IY57 180 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 KATNAL2Q8IYT4 538 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 ZDHHC14Q8IZN3 488 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 DEPDC1BQ8WUY9 529 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 OTUB2Q96DC9 234 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 C1orf74Q96LT6 269 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 C16orf45Q96MC5 204 aaPredicted RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 WDR24Q96S15 920 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 KCTD15Q96SI1 283 aaPredicted RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 THG1LQ9NWX6 298 aaKnown RBP16.74■□□□□ 0.27
VHL-203ENST00000477538 OR12D3Q9UGF7 316 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 WNT6Q9Y6F9 365 aa16.74■□□□□ 0.27
VHL-203ENST00000477538 NYNRINQ9P2P1 1898 aaKnown RBP16.73■□□□□ 0.27
VHL-203ENST00000477538 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 F5H5T6 163 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 PI4K2BG5E9Z4 385 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 ENC1O14682 589 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 PSMC3P17980 439 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 L1CAMP32004 1257 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 CHKAP35790 457 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 IFNAR2P48551 515 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 PEX5P50542 639 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 VCPP55072 806 aaKnown RBP16.73■□□□□ 0.27
VHL-203ENST00000477538 RWDD2BP57060 319 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 ETF1P62495 437 aaKnown RBP16.73■□□□□ 0.27
VHL-203ENST00000477538 NRG1Q02297 640 aaPredicted RBP16.73■□□□□ 0.27
VHL-203ENST00000477538 FCHO2Q0JRZ9 810 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 SEMA3BQ13214 749 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 AUHQ13825 339 aaKnown RBP16.73■□□□□ 0.27
VHL-203ENST00000477538 GRM2Q14416 872 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 PDK2Q15119 407 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 RFWD3Q6PCD5 774 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 LGI2Q8N0V4 545 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 CPXM2Q8N436 756 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 KCTD6Q8NC69 237 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 OSCP1Q8WVF1 389 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms