RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DHX58Q96C10 678 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 TNIP3Q96KP6 325 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 FCRL3Q96P31 734 aaPredicted RBP10.23□□□□□ -0.77
COL4A5-204ENST00000477429 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 USP3Q9Y6I4 520 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 ENC1O14682 589 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 PAPSS1O43252 624 aaPredicted RBP10.22□□□□□ -0.77
COL4A5-204ENST00000477429 SEMA4FO95754 770 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 CCT8P50990 548 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 BNIP3Q12983 259 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 ZACNQ401N2 412 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 HES3Q5TGS1 186 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 FBXL19Q6PCT2 694 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 SHC4Q6S5L8 630 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 TMPRSS12Q86WS5 348 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 C12orf56Q8IXR9 622 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL4A5-204ENST00000477429 SAP25Q8TEE9 199 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 TSC1Q92574 1164 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 CYFIP2Q96F07 1278 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 MYO19Q96H55 970 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 ARID3AQ99856 593 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 TNMDQ9H2S6 317 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 OSGEPQ9NPF4 335 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 ABCB8Q9NUT2 735 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 DMAC2Q9NW81 257 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 FTSJ1Q9UET6 329 aa10.22□□□□□ -0.77
COL4A5-204ENST00000477429 ARID1BQ8NFD5 2236 aaPredicted RBP10.21□□□□□ -0.77
COL4A5-204ENST00000477429 GOLGA6L7A0A1B0GV03 622 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 A0A1W2PR77 199 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 SLC12A8A0AV02 714 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 EXOC3O60645 756 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 ASS1P00966 412 aaKnown RBP10.21□□□□□ -0.77
COL4A5-204ENST00000477429 HLA-DRAP01903 254 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 JUPP14923 745 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CD58P19256 250 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 SYT1P21579 422 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CD27P26842 260 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CD70P32970 193 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 TXLNAP40222 546 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 ZNF132P52740 706 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 INCA1Q0VD86 236 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CUL4AQ13619 759 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CUL4BQ13620 913 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 SUZ12Q15022 739 aaKnown RBP10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CNNM4Q6P4Q7 775 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CHST9Q7L1S5 443 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 KANSL1Q7Z3B3 1105 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 KIAA0907Q7Z7F0 614 aaPredicted RBP10.21□□□□□ -0.77
COL4A5-204ENST00000477429 UNC93AQ86WB7 457 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 ERICH1Q86X53 443 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 ZNF276Q8N554 614 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 EID2Q8N6I1 236 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 KIAA0895Q8NCT3 520 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 LSM14AQ8ND56 463 aaKnown RBP10.21□□□□□ -0.77
COL4A5-204ENST00000477429 DDI1Q8WTU0 396 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 CNDP2Q96KP4 475 aaKnown RBP10.21□□□□□ -0.77
COL4A5-204ENST00000477429 LMLNQ96KR4 655 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 C7orf25Q9BPX7 421 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 PCED1AQ9H1Q7 454 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 MTMR6Q9Y217 621 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 PCDHA5Q9Y5H7 936 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 AK5Q9Y6K8 562 aa10.21□□□□□ -0.77
COL4A5-204ENST00000477429 MYLKQ15746 1914 aa10.21□□□□□ -0.78
COL4A5-204ENST00000477429 MYH10P35580 1976 aa10.21□□□□□ -0.78
COL4A5-204ENST00000477429 TP53BP1Q12888 1972 aaPredicted RBP10.21□□□□□ -0.78
COL4A5-204ENST00000477429 FAM47DPA6NHR8 397 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 NPC1O15118 1278 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 VILLO15195 856 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 KLRC4O43908 158 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 BRINP1O60477 761 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 GABBR2O75899 941 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 CLSTN1O94985 981 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 KIF20AO95235 890 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 METAP1P53582 386 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 GALCP54803 685 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 TLE3Q04726 772 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 PPP3CAQ08209 521 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 GOLGA8FQ08AF8 430 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 GOLGA8DPQ0D2H9 430 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 CCDC173Q0VFZ6 552 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 STK4Q13043 487 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 RTP5Q14D33 572 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 TRIP4Q15650 581 aaPredicted RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 KNOP1Q1ED39 458 aaKnown RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 FNDC3BQ53EP0 1204 aaKnown RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 KIAA0895LQ68EN5 471 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 NCEH1Q6PIU2 408 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 STXBP4Q6ZWJ1 553 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
COL4A5-204ENST00000477429 SPACA3Q8IXA5 215 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 CPXM2Q8N436 756 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 LINC00301Q8NCQ3 95 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 UCMAQ8WVF2 138 aa10.2□□□□□ -0.78
COL4A5-204ENST00000477429 NXPE2Q96DL1 559 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms