RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 KRT10P13645 584 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 FOSL2P15408 326 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 KDELR1P24390 212 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.87
PGK1-204ENST00000477335 CORO1AP31146 461 aaKnown RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 SLC6A4P31645 630 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 CCR1P32246 355 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 GBP1P32455 592 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 VIPR2P41587 438 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 CDKN2BP42772 138 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 SGSHP51688 502 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 RWDD2BP57060 319 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 RING1Q06587 406 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 USP4Q13107 963 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 DPYSL3Q14195 570 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 DPYSL2Q16555 572 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 HADHQ16836 314 aaKnown RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 FAM133BQ5BKY9 247 aaKnown RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 MS4A13Q5J8X5 152 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 FAM78AQ5JUQ0 283 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 BRMS1LQ5PSV4 323 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 MANEALQ5VSG8 457 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 SPOCD1Q6ZMY3 1216 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 CREG2Q8IUH2 290 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 PQLC3Q8N755 202 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 EXD1Q8NHP7 514 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 ZSCAN18Q8TBC5 510 aaPredicted RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 SH3RF2Q8TEC5 729 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 PPM1EQ8WY54 764 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 RNF34Q969K3 372 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 NACA2Q9H009 215 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 ETNK2Q9NVF9 386 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 CWC15Q9P013 229 aaKnown RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 CFAP97Q9P2B7 532 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 AGO1Q9UL18 857 aaKnown RBP9.62□□□□□ -0.87
PGK1-204ENST00000477335 NR2E1Q9Y466 385 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 HS3ST4Q9Y661 456 aa9.62□□□□□ -0.87
PGK1-204ENST00000477335 XIRP2A4UGR9 3374 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 HELZP42694 1942 aaKnown RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 hCG_1818297A0A087WSY0 165 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 LRRD1A4D1F6 860 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 KIF2AO00139 706 aaPredicted RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 TRDMT1O14717 391 aaKnown RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 KRT7P08729 469 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 SRGAP2BP0DMP2 458 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 GOT1P17174 413 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 PFKLP17858 780 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 KCNA5P22460 613 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 VCPP55072 806 aaKnown RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 CDH6P55285 790 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 ITIH3Q06033 890 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 SIX1Q15475 284 aaPredicted RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 ZNF77Q15935 545 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 ARHGAP15Q53QZ3 475 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 BOLA3Q53S33 107 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 EFHC2Q5JST6 749 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 RAP1GAP2Q684P5 730 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 RFWD3Q6PCD5 774 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 TADA2BQ86TJ2 420 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 CIR1Q86X95 450 aaPredicted RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 DENND1CQ8IV53 801 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 ARID3BQ8IVW6 561 aaPredicted RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 BBS7Q8IWZ6 715 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 RASGEF1CQ8N431 466 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 UBL4BQ8N7F7 174 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 NETO2Q8NC67 525 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 LRRN4CLQ8ND94 238 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 PCDH19Q8TAB3 1148 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 IGSF8Q969P0 613 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 PLD4Q96BZ4 506 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 FAF2Q96CS3 445 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 ASIC4Q96FT7 647 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 CAPZA3Q96KX2 299 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 PRICKLE1Q96MT3 831 aaPredicted RBP9.61□□□□□ -0.87
PGK1-204ENST00000477335 CSPG4P5Q96PW8 444 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 HAPLN3Q96S86 360 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 NCAPGQ9BPX3 1015 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 HEMGNQ9BXL5 484 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 SIK2Q9H0K1 926 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.61□□□□□ -0.87
PGK1-204ENST00000477335 CD207Q9UJ71 328 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 BRWD1Q9NSI6 2320 aa9.61□□□□□ -0.87
PGK1-204ENST00000477335 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 MBTPS2O43462 519 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 CEP104O60308 925 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 ACSL4O60488 711 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 URI1O94763 535 aaPredicted RBP9.6□□□□□ -0.87
PGK1-204ENST00000477335 LRIG2O94898 1065 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.87
PGK1-204ENST00000477335 APOEP02649 317 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 PRLRP16471 622 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 AMPD1P23109 780 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 WEE1P30291 646 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 HOXC13P31276 330 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 PTPN7P35236 360 aa9.6□□□□□ -0.87
PGK1-204ENST00000477335 KPNA1P52294 538 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms