RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SULF2Q8IWU5 870 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 LINC00301Q8NCQ3 95 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 SCFD1Q8WVM8 642 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 PIGKQ92643 395 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 SLC22A12Q96S37 553 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 LINC00597Q9H2U6 94 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 FBRSL1Q9HCM7 1045 aaKnown RBP7.67□□□□□ -1.18
BRCA1-214ENST00000477152 FRMD4BQ9Y2L6 1034 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 VPS13AQ96RL7 3174 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 H0Y626 953 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 TRIM16O95361 564 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 F13A1P00488 732 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 OAS1P00973 400 aaKnown RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 MYL1P05976 194 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 GSTM4Q03013 218 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF252P-AS1Q0IIN9 211 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 DUOXA1Q1HG43 343 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ANO4Q32M45 955 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SYCP2LQ5T4T6 812 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SNX30Q5VWJ9 437 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 LYSMD4Q5XG99 296 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 UNC93AQ86WB7 457 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 TTC39CQ8N584 583 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 CCDC33Q8N5R6 958 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 TXNDC5Q8NBS9 432 aaKnown RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 TTC9Q92623 222 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 MRPL45Q9BRJ2 306 aaKnown RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 TPSD1Q9BZJ3 242 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 IKZF4Q9H2S9 585 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SMPD4Q9NXE4 827 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SUSD2Q9UGT4 822 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 USP25Q9UHP3 1055 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF510Q9Y2H8 683 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 GPR179Q6PRD1 2367 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 MYO15AQ9UKN7 3530 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 PLXND1Q9Y4D7 1925 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 NPC1O15118 1278 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 CLIC2O15247 247 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 HOXC11O43248 304 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 OIP5O43482 229 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 CALUO43852 315 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 NDUFS2O75306 463 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 PROS1P07225 676 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 GNSP15586 552 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 AMPD1P23109 780 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ATP5C1P36542 298 aaKnown RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 P2RY2P41231 377 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ME1P48163 572 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF132P52740 706 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SLC8A3P57103 927 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ARID5AQ03989 594 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 GFPT1Q06210 699 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 PWP1Q13610 501 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 BMT2Q1RMZ1 405 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 UAP1L1Q3KQV9 507 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 TRIM61Q5EBN2 209 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 GRAMD4Q6IC98 578 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 EPM2AIP1Q7L775 607 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 NELFCDQ8IXH7 590 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ALLCQ8N6M5 410 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 ZSWIM2Q8NEG5 633 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 UCMAQ8WVF2 138 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 FAM124BQ9H5Z6 455 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-214ENST00000477152 SPHK2Q9NRA0 654 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 EXOC1Q9NV70 894 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 MTMR6Q9Y217 621 aa7.66□□□□□ -1.18
BRCA1-214ENST00000477152 CEP192Q8TEP8 1941 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 TCRBV21S2A2A0A5A6 115 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 LNP1A1A4G5 178 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 H3BRJ5 948 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 DCLK1O15075 740 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 POLR2DO15514 142 aaKnown RBP7.65□□□□□ -1.18
BRCA1-214ENST00000477152 GREM1O60565 184 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 KRT37O76014 449 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 CST3P01034 146 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-214ENST00000477152 RALAP11233 206 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 NME2P22392 152 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 NTSR1P30989 418 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 MYL6P60660 151 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 LY6G5CQ5SRR4 150 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 SLC23A3Q6PIS1 610 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 RHBDF2Q6PJF5 856 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 DMRTC2Q8IXT2 367 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-214ENST00000477152 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 MDGA1Q8NFP4 955 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 OLIG1Q8TAK6 271 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 RIN3Q8TB24 985 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 HMGB4Q8WW32 186 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 B3GNT5Q9BYG0 378 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 DCLK3Q9C098 648 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF518BQ9C0D4 1074 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 RNF38Q9H0F5 515 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 INVSQ9Y283 1065 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 EFR3BQ9Y2G0 817 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 PCDHA5Q9Y5H7 936 aa7.65□□□□□ -1.18
BRCA1-214ENST00000477152 UPK3BL1B0FP48 263 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms