RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 SMIM10L2BP0DMW5 78 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 XKR4Q5GH76 650 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 PACS1Q6VY07 963 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 RNF139Q8WU17 664 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 WDR60Q8WVS4 1066 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 NT5C3BQ969T7 300 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 P2RY11Q96G91 374 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 ZNF560Q96MR9 790 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 CEP41Q9BYV8 373 aa21.68■■□□□ 1.06
LIMS2-214ENST00000476932 MBLAC1A4D2B0 266 aaPredicted RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 LMNAP02545 664 aaKnown RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 MGAT1P26572 445 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 AQP5P55064 265 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 SARNPP82979 210 aaKnown RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 PSTKQ8IV42 348 aaKnown RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 HACE1Q8IYU2 909 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 TEX9Q8N6V9 391 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 APPL2Q8NEU8 664 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 WWP1Q9H0M0 922 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 PSAT1Q9Y617 370 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 SDR42E2A6NKP2 422 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 OPHN1O60890 802 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 KITP10721 976 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 KCNE1P15382 129 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 CPA2P48052 419 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 GLUD2P49448 558 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 WASHC5Q12768 1159 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 GRB14Q14449 540 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 UBXN11Q5T124 520 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 MBLAC2Q68D91 279 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 KYAT3Q6YP21 454 aaKnown RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 USP50Q70EL3 339 aaPredicted RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 GPR142Q7Z601 462 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 CRLF3Q8IUI8 442 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 ZC3H15Q8WU90 426 aaKnown RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 ZNF778Q96MU6 729 aa21.67■■□□□ 1.06
LIMS2-214ENST00000476932 PPARGC1AQ9UBK2 798 aaKnown RBP21.67■■□□□ 1.06
LIMS2-214ENST00000476932 SF3B1O75533 1304 aaKnown RBP eCLIP21.66■■□□□ 1.06
LIMS2-214ENST00000476932 SMIM35A0A1B0GVV1 85 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 BTBD19C9JJ37 291 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 TPP1O14773 563 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 BEST1O76090 585 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PSMB4P28070 264 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 TAF6P49848 677 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 SESN2P58004 480 aaPredicted RBP21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PDE1CQ14123 709 aaPredicted RBP21.66■■□□□ 1.06
LIMS2-214ENST00000476932 CMPK2Q5EBM0 449 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 STXBP5Q5T5C0 1151 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 C16orf46Q6P387 395 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 CASC4Q6P4E1 433 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 TP53INP2Q8IXH6 220 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 B3GALNT2Q8NCR0 500 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 MCUR1Q96AQ8 359 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 FAM149B1Q96BN6 582 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 MS4A4AQ96JQ5 239 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 NPY6RQ99463 290 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 XPNPEP3Q9NQH7 507 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PIN4Q9Y237 131 aaKnown RBP21.66■■□□□ 1.06
LIMS2-214ENST00000476932 KRT36O76013 467 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 F2P00734 622 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PRKCGP05129 697 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 CYP2C9P11712 490 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PGAM1P18669 254 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 IRX4P78413 519 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 STX3Q13277 289 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PCBP1Q15365 356 aaKnown RBP eCLIP21.66■■□□□ 1.062e-6■■■■■ 32.7
LIMS2-214ENST00000476932 DCAF6Q58WW2 860 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PAQR9Q6ZVX9 377 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 CFAP61Q8NHU2 1237 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 ACMSDQ8TDX5 336 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 HNRNPABQ99729 332 aaKnown RBP21.66■■□□□ 1.06
LIMS2-214ENST00000476932 TINF2Q9BSI4 451 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 CCDC106Q9BWC9 280 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 DUSP16Q9BY84 665 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 ABHD16BQ9H3Z7 469 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 SYBUQ9NX95 663 aa21.66■■□□□ 1.06
LIMS2-214ENST00000476932 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-214ENST00000476932 CLDN5O00501 218 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 ENO1P06733 434 aaKnown RBP21.65■■□□□ 1.06
LIMS2-214ENST00000476932 FGF3P11487 239 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-214ENST00000476932 PNPLA4P41247 253 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 CDC42EP1Q00587 391 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 AP1B1Q10567 949 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 DPYSQ14117 519 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 RCN1Q15293 331 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 DBN1Q16643 649 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 FASTKD1Q53R41 847 aaKnown RBP21.65■■□□□ 1.06
LIMS2-214ENST00000476932 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 ZNF567Q8N184 647 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 SLC10A4Q96EP9 437 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 EBF4Q9BQW3 602 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 THAP1Q9NVV9 213 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 NRCAMQ92823 1304 aa21.65■■□□□ 1.06
LIMS2-214ENST00000476932 H3BRJ5 948 aa21.64■■□□□ 1.06
LIMS2-214ENST00000476932 ITM2AO43736 263 aa21.64■■□□□ 1.06
LIMS2-214ENST00000476932 EPHX2P34913 555 aa21.64■■□□□ 1.06
LIMS2-214ENST00000476932 GCKP35557 465 aa21.64■■□□□ 1.06
LIMS2-214ENST00000476932 NDUFV1P49821 464 aa21.64■■□□□ 1.06
LIMS2-214ENST00000476932 SNX17Q15036 470 aa21.64■■□□□ 1.06
LIMS2-214ENST00000476932 MDH1BQ5I0G3 518 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms