RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MAD1L1Q9Y6D9 718 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 SF3B1O75533 1304 aaKnown RBP eCLIP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 A0A0A0MRY4 1105 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 CXorf49A8MYA2 514 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 PTGESO14684 152 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 HCRTO43612 131 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 T-ENOLP0DO92 83 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 AMPD1P23109 780 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 TARSP26639 723 aaKnown RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 LRPAP1P30533 357 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 CD52P31358 61 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 GRK4P32298 578 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 NOS2P35228 1153 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 ARFIP2P53365 341 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 LILRA4P59901 499 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 TRIM71Q2Q1W2 868 aaKnown RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 PIGZQ86VD9 579 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 DEFB106AQ8N104 65 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 B3GALNT2Q8NCR0 500 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 PTPRN2Q92932 1015 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 NT5C3BQ969T7 300 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 SPATA13Q96N96 652 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 C12orf65Q9H3J6 166 aaKnown RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 HMX1Q9NP08 348 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 EIF2B3Q9NR50 452 aaKnown RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 FAM105AQ9NUU6 356 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 HAO1Q9UJM8 370 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 STAP1Q9ULZ2 295 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 H3BRJ5 948 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 DNAJC6O75061 913 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 SULT1E1P49888 294 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 AFF1P51825 1210 aaKnown RBP16.96■□□□□ 0.31
TMEM53-208ENST00000476724 MRPS5P82675 430 aaKnown RBP16.96■□□□□ 0.31
TMEM53-208ENST00000476724 TAF1BQ53T94 588 aaPredicted RBP16.96■□□□□ 0.31
TMEM53-208ENST00000476724 PLEKHG4Q58EX7 1191 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 ANKRD20A2Q5SQ80 823 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 ANKRD20A1Q5TYW2 823 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 ANKRD20A3Q5VUR7 823 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 TIFABQ6ZNK6 161 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 SLAIN1Q8ND83 568 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 AGAP11Q8TF27 550 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 LPPQ93052 612 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 TBC1D31Q96DN5 1066 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 EBF2Q9HAK2 575 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 MOCS1Q9NZB8 636 aa16.96■□□□□ 0.31
TMEM53-208ENST00000476724 RPL26L1Q9UNX3 145 aaKnown RBP16.96■□□□□ 0.31
TMEM53-208ENST00000476724 MGEA5O60502 916 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 OPHN1O60890 802 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 RFPL1O75677 317 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 GOT1P17174 413 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 PTPN4P29074 926 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 E2F5Q15329 346 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 ATG16L1Q676U5 607 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 BNIPLQ7Z465 357 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 CLNKQ7Z7G1 428 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 MTDHQ86UE4 582 aaKnown RBP16.95■□□□□ 0.3
TMEM53-208ENST00000476724 RFWD2Q8NHY2 731 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 RAB3IL1Q8TBN0 382 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 FAM149B1Q96BN6 582 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 SLC7A6OSQ96CW6 309 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-208ENST00000476724 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 SMYD2Q9NRG4 433 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 CACNG4Q9UBN1 327 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 PADI3Q9ULW8 664 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 NOD1Q9Y239 953 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 TRIM17Q9Y577 477 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 CABYRO75952 493 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 NPR3P17342 541 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 BGNP21810 368 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 IGFBP6P24592 240 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-208ENST00000476724 GLUD2P49448 558 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 AIF1P55008 147 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 LPIN1Q14693 890 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 PDK1Q15118 436 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 STEAP4Q687X5 459 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 STAMBPL1Q96FJ0 436 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 NPY6RQ99463 290 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 NAT9Q9BTE0 207 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
TMEM53-208ENST00000476724 DCTN4Q9UJW0 460 aa16.95■□□□□ 0.3
TMEM53-208ENST00000476724 A0A1W2PQ45 241 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-208ENST00000476724 A0A1W2PQY0 241 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 MOXD2PA6NHM9 499 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 SDR42E2A6NKP2 422 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 GPR182O15218 404 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 PTPN1P18031 435 aaKnown RBP16.94■□□□□ 0.3
TMEM53-208ENST00000476724 CRHR1P34998 444 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 ADIGQ0VDE8 80 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 OVGP1Q12889 678 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 DCAF6Q58WW2 860 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 LRRC8BQ6P9F7 803 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 FAM131BQ86XD5 332 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 GSTCDQ8NEC7 633 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 UTP4Q969X6 686 aaKnown RBP16.94■□□□□ 0.3
TMEM53-208ENST00000476724 C7orf26Q96N11 449 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 SLC9A7Q96T83 725 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 MAGEB5Q9BZ81 275 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms