RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TMEM134Q9H6X4 195 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 C6orf203Q9P0P8 240 aaPredicted RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 TMEM98Q9Y2Y6 226 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 NME7Q9Y5B8 376 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 TSC2P49815 1807 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 F8W8V4 182 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 PFKMP08237 780 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 GSTT2P0CG29 244 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 GSTT2BP0CG30 244 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 MAGEA3P43357 314 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 RPL5P46777 297 aaKnown RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 SERPINB8P50452 374 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 AQP5P55064 265 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 WASHC5Q12768 1159 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 DPYSL3Q14195 570 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 PIGHQ14442 188 aaPredicted RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 AGAP9Q5VTM2 703 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 SNRNP48Q6IEG0 339 aaKnown RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 FAM71DQ8N9W8 422 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 GIPC3Q8TF64 312 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 KHSRPQ92945 711 aaKnown RBP eCLIP8.64□□□□□ -1.03
VAPB-205ENST00000476395 PPP1R10Q96QC0 940 aaKnown RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 DCUN1D5Q9BTE7 237 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 SELENONQ9NZV5 590 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 LOC100653049A0A140TA62 436 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 KBTBD13C9JR72 458 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ATP2A1O14983 1001 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 TM9SF1O15321 606 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 DNAJA2O60884 412 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 KRT34O76011 436 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 GABRB2P47870 512 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CDKL1Q00532 357 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CNTN2Q02246 1040 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 GRM1Q13255 1194 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 KRT72Q14CN4 511 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CYTH1Q15438 398 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CIAPIN1Q6FI81 312 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 GRAMD4Q6IC98 578 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 WDR49Q8IV35 697 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 GALNT4Q8N4A0 578 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 AGBL3Q8NEM8 1001 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ACO2Q99798 780 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 MAGEB5Q9BZ81 275 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 IMPG2Q9BZV3 1241 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 POPDC2Q9HBU9 364 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 IGSF5Q9NSI5 407 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 PIM2Q9P1W9 311 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ZNF112Q9UJU3 913 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 EVPLQ92817 2033 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 MCM3APO60318 1980 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 HTR3EA5X5Y0 456 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 XPO1O14980 1071 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 LPXNO60711 386 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 HNRNPCL1O60812 293 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 SERPINB7O75635 380 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 TGDSO95455 350 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 PROCP04070 461 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CALB1P05937 261 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 GJB1P08034 283 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 MSL3P1P0C860 447 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ICAM3P32942 547 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CDH8P55286 799 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 YWHAZP63104 245 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 SNAPC2Q13487 334 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 NBPF12Q5TAG4 269 aaPredicted RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 ITPRIPL1Q6GPH6 555 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 DNAJC24Q6P3W2 148 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 PQLC3Q8N755 202 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 SLC4A11Q8NBS3 891 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 FNIP1Q8TF40 1166 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CXCL16Q9H2A7 254 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 PNPLA8Q9NP80 782 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 XPO7Q9UIA9 1087 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 MTO1Q9Y2Z2 717 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 SPECC1L-ADORA2AF8WAN1 911 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 H3BNX3 289 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 PIK3R2O00459 728 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 FARP2O94887 1054 aaPredicted RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 TRUB2O95900 331 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 CDH2P19022 906 aaPredicted RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 MIPP30301 263 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 FDFT1P37268 417 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 BACE1P56817 501 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ZNF280AP59817 542 aaPredicted RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 PFKPQ01813 784 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 BST1Q10588 318 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 COL19A1Q14993 1142 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 SMAD1Q15797 465 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 EFHC1Q5JVL4 640 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ZNF410Q86VK4 478 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.63□□□□□ -1.03
VAPB-205ENST00000476395 HSPH1Q92598 858 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 RTP4Q96DX8 246 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 MCRS1Q96EZ8 462 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 APOPT1Q96IL0 206 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 RILPQ96NA2 401 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ELOVL4Q9GZR5 314 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 LHX5Q9H2C1 402 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms