RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 WARS2Q9UGM6 360 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM59LQ9UK28 342 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CRYL1Q9Y2S2 319 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RREB1Q92766 1687 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NUP214P35658 2090 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NEMP2A6NFY4 417 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ERI2A8K979 691 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 POMCP01189 267 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NUDT17P0C025 328 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TGM2P21980 687 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CALB2P22676 271 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NAGLUP54802 743 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 AP2B1P63010 937 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PITX1P78337 314 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 GTF2BQ00403 316 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 MED21Q13503 144 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TFDP2Q14188 446 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PIGHQ14442 188 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PDK1Q15118 436 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NOMO1Q15155 1222 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ZACNQ401N2 412 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NOMO2Q5JPE7 1267 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PPM1LQ5SGD2 360 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TMTC4Q5T4D3 741 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF618Q5T7W0 954 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PPP1R26Q5T8A7 1209 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 MILR1Q7Z6M3 343 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 C4orf19Q8IY42 314 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 COLGALT1Q8NBJ5 622 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 EXD1Q8NHP7 514 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CYGBQ8WWM9 190 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ELMO2Q96JJ3 720 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TTC25Q96NG3 672 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CADM1Q9BY67 442 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ROPN1BQ9BZX4 212 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ROPN1Q9HAT0 212 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 DPP3Q9NY33 737 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 DSEQ9UL01 958 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 AP4E1Q9UPM8 1137 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SMG5Q9UPR3 1016 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ECM29Q5VYK3 1845 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ARID1AO14497 2285 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 hCG_1818297A0A087WSY0 165 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 A0A1W2PQ67 120 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 GTPBP10A4D1E9 387 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM233B4DJY2 109 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TRDMT1O14717 391 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ITM2AO43736 263 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 HUS1O60921 280 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TBX10O75333 385 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CNMDO75829 334 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LDHAP00338 332 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CYP1A2P05177 515 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 EDN1P05305 212 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PSMC3P17980 439 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 GARTP22102 1010 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PTPN4P29074 926 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 VHLP40337 213 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TPI1P60174 286 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SEMG2Q02383 582 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PTK6Q13882 451 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CARTPTQ16568 116 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 OTUD3Q5T2D3 398 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ANGPTL8Q6UXH0 198 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PLEKHH3Q7Z736 793 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SNX32Q86XE0 403 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 C10orf107Q8IVU9 208 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 AGGF1Q8N302 714 aaeCLIP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 GABPB2Q8TAK5 448 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LPAR1Q92633 364 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 MFSD3Q96ES6 412 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 FIZ1Q96SL8 496 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CDRT15Q96T59 188 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 AGAP2Q99490 1192 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SLC39A3Q9BRY0 314 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SNRNP25Q9BV90 132 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NT5C1AQ9BXI3 368 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 WWP1Q9H0M0 922 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ETNK2Q9NVF9 386 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 HACD3Q9P035 362 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CIDEBQ9UHD4 219 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ANGPTL2Q9UKU9 493 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ZDBF2Q9HCK1 2354 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NCANO14594 1321 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 MYPNQ86TC9 1320 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 ARHGAP10A1A4S6 786 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 OGTO15294 1046 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 MAN1A2O60476 641 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 VAPBO95292 243 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CSH1P0DML2 217 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CSH2P0DML3 217 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 FKBP1AP62942 108 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PLOD1Q02809 727 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TBL3Q12788 808 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 XRCC4Q13426 336 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 FLOT2Q14254 428 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DGKDQ16760 1214 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PLEKHG4Q58EX7 1191 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CERCAMQ5T4B2 595 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms