RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CCDC195A0A1B0GUA6 201 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 KCNU1A8MYU2 1149 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 LINC01565O15544 149 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 RAD51CO43502 376 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 CCR1P32246 355 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 LMAN1P49257 510 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 PSEN1P49768 467 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 HSP90B2PQ58FF3 399 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 LEKR1Q6ZMV7 388 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 MAK16Q9BXY0 300 aaKnown RBP18.72■□□□□ 0.59
ATG4B-217ENST00000475693 ARHGEF38Q9NXL2 777 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 TLR6Q9Y2C9 796 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 HEY1Q9Y5J3 304 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 ANAPC1Q9H1A4 1944 aa18.72■□□□□ 0.59
ATG4B-217ENST00000475693 MTCL1Q9Y4B5 1905 aaKnown RBP18.72■□□□□ 0.59
ATG4B-217ENST00000475693 TARSL2A2RTX5 802 aaKnown RBP18.71■□□□□ 0.59
ATG4B-217ENST00000475693 IRAK1P51617 712 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 NRLP54845 237 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 PIK3R6Q5UE93 754 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 GRASPQ7Z6J2 395 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-217ENST00000475693 ITIH5Q86UX2 942 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 PLD5Q8N7P1 536 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 TRIM62Q9BVG3 475 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 FEZ2Q9UHY8 353 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-217ENST00000475693 DNPEPQ9ULA0 475 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 HS3ST4Q9Y661 456 aa18.71■□□□□ 0.59
ATG4B-217ENST00000475693 TRDMT1O14717 391 aaKnown RBP18.7■□□□□ 0.58
ATG4B-217ENST00000475693 TTI1O43156 1089 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 LRIG2O94898 1065 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 OAS1P00973 400 aaKnown RBP18.7■□□□□ 0.58
ATG4B-217ENST00000475693 SLC10A2Q12908 348 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-217ENST00000475693 PDK2Q15119 407 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 MAP9Q49MG5 647 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 ARTNQ5T4W7 220 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 SNX30Q5VWJ9 437 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 DCLK3Q9C098 648 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 VPS18Q9P253 973 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 DNMT3LQ9UJW3 386 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 ESYT3A0FGR9 886 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 TJP3O95049 919 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 COPS2P61201 443 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 OTUD4Q01804 1114 aaKnown RBP18.7■□□□□ 0.58
ATG4B-217ENST00000475693 GBE1Q04446 702 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 PPP2R5EQ16537 467 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 ARL13BQ3SXY8 428 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 MAP7D3Q8IWC1 876 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 MMGT1Q8N4V1 131 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 PDZD8Q8NEN9 1154 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 ACTL9Q8TC94 416 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 NTAN1Q96AB6 310 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 CEP295NLQ96MC4 621 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 NAP1L3Q99457 506 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-217ENST00000475693 TRIM51Q9BSJ1 452 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 ZNF576Q9H609 170 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 MAFFQ9ULX9 164 aa18.7■□□□□ 0.58
ATG4B-217ENST00000475693 COLQQ9Y215 455 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-217ENST00000475693 EEF2KO00418 725 aaKnown RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 KLKB1P03952 638 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 RGS19P49795 217 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 SEMA3BQ13214 749 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 CBX2Q14781 532 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 TRIP13Q15645 432 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 DUSP6Q16828 381 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 CCDC137Q6PK04 289 aaKnown RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ZC3H18Q86VM9 953 aaKnown RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ELMOD1Q8N336 334 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ING5Q8WYH8 240 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ZNF707Q96C28 371 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 FAM161BQ96MY7 647 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ASAH2Q9NR71 780 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ARHGEF4Q9NR80 690 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 MPP6Q9NZW5 540 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 NOTCH4Q99466 2003 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 MOSPD3O75425 235 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 RHOP08100 348 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 MBL2P11226 248 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 HDCP19113 662 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 CETN2P41208 172 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 SCAPQ12770 1279 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 TRIP4Q15650 581 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 RWDD4Q6NW29 188 aaKnown RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 RFX8Q6ZV50 586 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 BBS12Q6ZW61 710 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 GLIS1Q8NBF1 620 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 SHKBP1Q8TBC3 707 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 OVCA2Q8WZ82 227 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 NCAPGQ9BPX3 1015 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 SLC46A2Q9BY10 475 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.69■□□□□ 0.58
ATG4B-217ENST00000475693 VANGL2Q9ULK5 521 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 ASB3Q9Y575 518 aa18.69■□□□□ 0.58
ATG4B-217ENST00000475693 PHF2O75151 1096 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 COILP38432 576 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 TEAD2Q15562 447 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 TCEAL5Q5H9L2 206 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 RAP1GAP2Q684P5 730 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 NADSYN1Q6IA69 706 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 RFWD3Q6PCD5 774 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms