RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 WASH4PA8MWX3 477 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 H3BNC9 293 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 H3BRJ5 948 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 C2CD2LO14523 706 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 DCLK1O15075 740 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TP73O15350 636 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TTI1O43156 1089 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ATP8B1O43520 1251 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TGM5O43548 720 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ZNF189O75820 626 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 HEXIM1O94992 359 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 OLFM2O95897 454 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 F11P03951 625 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ADH1AP07327 375 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 SLC2A3P11169 496 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 RARGP13631 454 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 PFKLP17858 780 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 KLRC2P26717 231 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 HOXA9P31269 272 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 CCR1P32246 355 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ALDH1A3P47895 512 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 RPIAP49247 311 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 CDR1P51861 262 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 KPNA1P52294 538 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 EPHA5P54756 1037 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 MLLT6P55198 1093 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 LMNB2Q03252 620 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 NME3Q13232 169 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 PLD1Q13393 1074 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 MTMR3Q13615 1198 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 CUL1Q13616 776 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 PTK6Q13882 451 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 BYSLQ13895 437 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 PAFAH1B3Q15102 231 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 SHHQ15465 462 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TRIP4Q15650 581 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 C5orf22Q49AR2 442 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 BEND6Q5SZJ8 279 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 FAM109BQ6ICB4 259 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 FBXO38Q6PIJ6 1188 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ADAT2Q7Z6V5 191 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 DNAJB7Q7Z6W7 309 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TMEM150AQ86TG1 271 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ZNF683Q8IZ20 524 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ALLCQ8N6M5 410 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ACTL9Q8TC94 416 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 GIPC2Q8TF65 315 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 AENQ8WTP8 325 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 GRK7Q8WTQ7 553 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 RNF139Q8WU17 664 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 SLC22A17Q8WUG5 538 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 POF1BQ8WVV4 589 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 C1orf54Q8WWF1 131 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 CASKIN2Q8WXE0 1202 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 AUTS2Q8WXX7 1259 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ATG4AQ8WYN0 398 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 AZIN2Q96A70 460 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 FCRL2Q96LA5 508 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 OLFM3Q96PB7 478 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 SEPT5Q99719 369 aaPredicted RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 C17orf80Q9BSJ5 609 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 EMILIN2Q9BXX0 1053 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 MAGEB5Q9BZ81 275 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TKTL2Q9H0I9 626 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 RAB17Q9H0T7 212 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 RETREG1Q9H6L5 497 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 CYP4F11Q9HBI6 524 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 USP29Q9HBJ7 922 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 EPB41L5Q9HCM4 733 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ARHGEF4Q9NR80 690 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 TLR9Q9NR96 1032 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 ZDHHC18Q9NUE0 388 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 GPATCH2LQ9NWQ4 482 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 DNPEPQ9ULA0 475 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 HBS1LQ9Y450 684 aaKnown RBP6.85□□□□□ -1.31
ATG4A-207ENST00000474825 INSL5Q9Y5Q6 135 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 RAD54BQ9Y620 910 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 LAMA3Q16787 3333 aa6.85□□□□□ -1.31
ATG4A-207ENST00000474825 IGLV3-10A0A075B6K4 115 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 BCLAF3A2AJT9 711 aaKnown RBP6.84□□□□□ -1.31
ATG4A-207ENST00000474825 ZSCAN5CA6NGD5 496 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-207ENST00000474825 DRGXA6NNA5 263 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 SOBPA7XYQ1 873 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 HACD1B0YJ81 288 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 FAM72CH0Y354 149 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 TERTO14746 1132 aaKnown RBP6.84□□□□□ -1.31
ATG4A-207ENST00000474825 APOL1O14791 398 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 TLR5O60602 858 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 ECEL1O95672 775 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 OAS1P00973 400 aaKnown RBP6.84□□□□□ -1.31
ATG4A-207ENST00000474825 MYBL2P10244 700 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 PECAM1P16284 738 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-207ENST00000474825 GOT1P17174 413 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 STIP1P31948 543 aaKnown RBP6.84□□□□□ -1.31
ATG4A-207ENST00000474825 ELF1P32519 619 aa6.84□□□□□ -1.31
ATG4A-207ENST00000474825 CTNNB1P35222 781 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms