RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TRIM42Q8IWZ5 723 aa21.86■■□□□ 1.09
SH3D21-202ENST00000474766 PIP4K2CQ8TBX8 421 aa21.86■■□□□ 1.09
SH3D21-202ENST00000474766 CNTN3Q9P232 1028 aa21.86■■□□□ 1.09
SH3D21-202ENST00000474766 P4HA1P13674 534 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 ARF4P18085 180 aaPredicted RBP21.85■■□□□ 1.09
SH3D21-202ENST00000474766 INCA1Q0VD86 236 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 MFSD10Q14728 455 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 ANKRD33Q7Z3H0 272 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 PPIL6Q8IXY8 311 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 MRRFQ96E11 262 aaKnown RBP21.85■■□□□ 1.09
SH3D21-202ENST00000474766 NMUR2Q9GZQ4 415 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 ZCWPW1Q9H0M4 648 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 TAGLN3Q9UI15 199 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 SSX2IPQ9Y2D8 614 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 FAM155BO75949 473 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 STAU1O95793 577 aaKnown RBP21.85■■□□□ 1.09
SH3D21-202ENST00000474766 CD48P09326 243 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 MIPP30301 263 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 GDF10P55107 478 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 DYNLT1P63172 113 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 GRM2Q14416 872 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 FAM126BQ8IXS8 530 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 ULK2Q8IYT8 1036 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 HPDLQ96IR7 371 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 C7orf26Q96N11 449 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 PANX3Q96QZ0 392 aa21.85■■□□□ 1.09
SH3D21-202ENST00000474766 DDX50Q9BQ39 737 aaKnown RBP21.85■■□□□ 1.09
SH3D21-202ENST00000474766 TRIP12Q14669 1992 aaPredicted RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 SPECC1L-ADORA2AF8WAN1 911 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 M0QYV0 167 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 BUD23O43709 281 aaKnown RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 TRUB2O95900 331 aaKnown RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 C3orf62Q6ZUJ4 267 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 TTC7BQ86TV6 843 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 NAT8LQ8N9F0 302 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 LZICQ8WZA0 190 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 CPT1BQ92523 772 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 CPB2Q96IY4 423 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 BARX2Q9UMQ3 279 aaPredicted RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 COL1A2P08123 1366 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 H3BRJ5 948 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 APOC4-APOC2K7ER74 178 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 ATP9BO43861 1147 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 ENDOD1O94919 500 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 APOC2P02655 101 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 ZNF143P52747 638 aaPredicted RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 ITGA9Q13797 1035 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 MAP7Q14244 749 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 TMEM132DQ14C87 1099 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 FAM47CQ5HY64 1035 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 ANKMY2Q8IV38 441 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 KCTD6Q8NC69 237 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 RBM15BQ8NDT2 890 aaKnown RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 NAT14Q8WUY8 206 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 KATNAL1Q9BW62 490 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 ITGA11Q9UKX5 1188 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 USP18Q9UMW8 372 aa21.84■■□□□ 1.09
SH3D21-202ENST00000474766 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.84■■□□□ 1.09
SH3D21-202ENST00000474766 SSTR1P30872 391 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 RPL22P35268 128 aaKnown RBP21.83■■□□□ 1.09
SH3D21-202ENST00000474766 FAAP100Q0VG06 881 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 HIC1Q14526 733 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 EFTUD2Q15029 972 aaKnown RBP eCLIP21.83■■□□□ 1.091e-7■□□□□ 9.7
SH3D21-202ENST00000474766 SH2D4BQ5SQS7 431 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 KLHL23Q8NBE8 558 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 HEXIM2Q96MH2 286 aaKnown RBP21.83■■□□□ 1.09
SH3D21-202ENST00000474766 TOX2Q96NM4 488 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 CYTH2Q99418 400 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 WWP1Q9H0M0 922 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 TRPV6Q9H1D0 765 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 ASNSD1Q9NWL6 643 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 LMCD1Q9NZU5 365 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 PCSK1NQ9UHG2 260 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 KIAA1257Q9ULG3 409 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 AKT3Q9Y243 479 aa21.83■■□□□ 1.09
SH3D21-202ENST00000474766 CD4P01730 458 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 VTNP04004 478 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 ASPHQ12797 758 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 TAF5Q15542 800 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 ANKRD22Q5VYY1 191 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 LCLAT1Q6UWP7 414 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 SH2D5Q6ZV89 423 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 PDSS2Q86YH6 399 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 TTC39CQ8N584 583 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 C10orf88Q9H8K7 445 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 RSAD1Q9HA92 442 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 TRMT13Q9NUP7 481 aaKnown RBP21.82■■□□□ 1.08
SH3D21-202ENST00000474766 SLC7A8Q9UHI5 535 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 SORCS3Q9UPU3 1222 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 GMEB1Q9Y692 573 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 LTBP2Q14767 1821 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 RNASEH1O60930 286 aaKnown RBP21.82■■□□□ 1.08
SH3D21-202ENST00000474766 SYN1P17600 705 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 CYP3A5P20815 502 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 BGNP21810 368 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 RBP5P82980 135 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 NT5DC4Q86YG4 428 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 OR6Y1Q8NGX8 325 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 RSAD2Q8WXG1 361 aa21.82■■□□□ 1.08
SH3D21-202ENST00000474766 MTBPQ96DY7 904 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms