RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 AS3MTQ9HBK9 375 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 FSCN3Q9NQT6 498 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 LRFN1Q9P244 771 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 ZBTB1Q9Y2K1 713 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF804BA4D1E1 1349 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 EMSYQ7Z589 1322 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 CYP2D7A0A087X1C5 515 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 AQP12BA6NM10 295 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 INPPL1O15357 1258 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 MBPP02686 304 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 ENO1P06733 434 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 CYP3A4P08684 503 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 IGFBP2P18065 325 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 TFEBP19484 476 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 THBS4P35443 961 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 RPS13P62277 151 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 RBM6P78332 1123 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SF3A3Q12874 501 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SLC14A1Q13336 389 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 GRM4Q14833 912 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SRSF7Q16629 238 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 MORN5Q5VZ52 161 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF782Q6ZMW2 699 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 DEF8Q6ZN54 512 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 ATG16L2Q8NAA4 619 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 STYXQ8WUJ0 223 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 CCT6BQ92526 530 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SDCCAG3Q96C92 435 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 PSMD1Q99460 953 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 EFHD1Q9BUP0 239 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 TMEM120AQ9BXJ8 343 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 CCDC134Q9H6E4 229 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 EPS8L2Q9H6S3 715 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SFXN1Q9H9B4 322 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 PRDM16Q9HAZ2 1276 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SAYSD1Q9NPB0 183 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 PRDM8Q9NQV8 689 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 BAG5Q9UL15 447 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 SCAF8Q9UPN6 1271 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 PCDHB2Q9Y5E7 798 aa3.73□□□□□ -1.81
ECHDC1-213ENST00000474240 CNTNAP2Q9UHC6 1331 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3DA0A087WVF3 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3IA0A087WXS9 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3EA0A087X179 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3KA0A087X1G2 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 LOC105369274A0A096LPK9 316 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 LOC102723532A0A0G2JNH3 316 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 WDR91A4D1P6 747 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3BA6NDS4 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3FA6NER0 549 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3LB9A6J9 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 HNRNPRO43390 633 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 DNPH1O43598 174 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 RPP40O75818 363 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 CER1O95813 267 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3HP0C7X1 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 CYP2D6P10635 497 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 AKR1A1P14550 325 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 KELP23276 732 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 RPS6KB1P23443 525 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 GRK5P34947 590 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 PCP4P48539 62 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 VPS41P49754 854 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 PLCD1P51178 756 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 GALNT1Q10472 559 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 PRKG1Q13976 671 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TRIM14Q14142 442 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 KPNB1Q14974 876 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 FAM83BQ5T0W9 1011 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 C10orf62Q5T681 223 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3GQ6DHY5 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3CQ6IPX1 549 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 SLC39A5Q6ZMH5 540 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF66Q6ZN08 573 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 TBC1D3Q8IZP1 549 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 OR4N4Q8N0Y3 316 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 GALNT15Q8N3T1 639 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 HMGB4Q8WW32 186 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 NPAS1Q99742 590 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 HERPUD2Q9BSE4 406 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 ISCA1Q9BUE6 129 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 HTATIP2Q9BUP3 242 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 PRSS22Q9GZN4 317 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 MYLK2Q9H1R3 596 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 MLXIPQ9HAP2 919 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 ASNSD1Q9NWL6 643 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 CNTN6Q9UQ52 1028 aa3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 HEMK1Q9Y5R4 338 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-213ENST00000474240 CYP3A7-CYP3A51PA0A087WV96 503 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 TRIM38O00635 465 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 PRYO14603 147 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 IRAK2O43187 625 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 SEPT4O43236 478 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 BCAR3O75815 825 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 TNFRSF6BO95407 300 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 PLAUP00749 431 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 NHLRC4P0CG21 123 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 ALADP13716 330 aa3.71□□□□□ -1.82
ECHDC1-213ENST00000474240 TGM2P21980 687 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms