RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 RNF217Q8TC41 542 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 FNIP1Q8TF40 1166 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 MRPS31Q92665 395 aaKnown RBP7.9□□□□□ -1.14
CCDC93-207ENST00000474006 MSLNLQ96KJ4 702 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 ZSWIM3Q96MP5 696 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 GCNAQ96QF7 691 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 CDK5RAP1Q96SZ6 601 aaKnown RBP7.9□□□□□ -1.14
CCDC93-207ENST00000474006 TBCBQ99426 244 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 NPY6RQ99463 290 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 SLC46A2Q9BY10 475 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 RAB6CQ9H0N0 254 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 TRPC7Q9HCX4 862 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 WDR6Q9NNW5 1121 aaKnown RBP7.9□□□□□ -1.14
CCDC93-207ENST00000474006 RRN3Q9NYV6 651 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 CALCOCO1Q9P1Z2 691 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 SFMBT1Q9UHJ3 866 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 CDH22Q9UJ99 828 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 STAP1Q9ULZ2 295 aa7.9□□□□□ -1.14
CCDC93-207ENST00000474006 MRPS23Q9Y3D9 190 aaKnown RBP7.9□□□□□ -1.14
CCDC93-207ENST00000474006 VWA8A3KMH1 1905 aa7.9□□□□□ -1.15
CCDC93-207ENST00000474006 SYNJ2BP-COX16A0A087WUM0 186 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 SLC12A8A0AV02 714 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 GRID2IPA4D2P6 1211 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 H3BQ06 376 aaPredicted RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 MDM4O15151 490 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 KIF5CO60282 957 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 RNF8O76064 485 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 F9P00740 461 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 OAS1P00973 400 aaKnown RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 COMTP21964 271 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 SLC1A1P43005 524 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 SULT1E1P49888 294 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 TUBP50607 506 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 ATXN1P54253 815 aaKnown RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 DEUP1Q05D60 604 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 NME3Q13232 169 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 EIF4EBP2Q13542 120 aaPredicted RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 ACAP1Q15027 740 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 CDO1Q16878 200 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 ARHGAP15Q53QZ3 475 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 STXBP5Q5T5C0 1151 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 GPR158Q5T848 1215 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 DAB2IPQ5VWQ8 1189 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 CC2D1AQ6P1N0 951 aaPredicted RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 SCYL2Q6P3W7 929 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 KLHDC10Q6PID8 442 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 BNIPLQ7Z465 357 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 SLFN11Q7Z7L1 901 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 DAAM2Q86T65 1068 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 TADA2BQ86TJ2 420 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 CPNE8Q86YQ8 564 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 MIB1Q86YT6 1006 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 NIPA2Q8N8Q9 360 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 ARL14EPQ8N8R7 260 aaPredicted RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 LRRC57Q8N9N7 239 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 DQX1Q8TE96 717 aaKnown RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 FAM172AQ8WUF8 416 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 PGAP3Q96FM1 320 aaPredicted RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 IFT43Q96FT9 208 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 RIPOR3Q96MK2 946 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 SLC22A12Q96S37 553 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 NACA2Q9H009 215 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 GOLPH3Q9H4A6 298 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 TASP1Q9H6P5 420 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 GKN1Q9NS71 199 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 DDIT4Q9NX09 232 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC93-207ENST00000474006 MARCH2Q9P0N8 246 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 COX16Q9P0S2 106 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 LCMT1Q9UIC8 334 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 HYOU1Q9Y4L1 999 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 CDH23Q9H251 3354 aa7.89□□□□□ -1.15
CCDC93-207ENST00000474006 PLXNA4Q9HCM2 1894 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 TRANK1O15050 2925 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 TRIOBPQ9H2D6 2365 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 TSC2P49815 1807 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 KIAA1671Q9BY89 1806 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 TRAV19A0A0A6YYK7 116 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 SOBPA7XYQ1 873 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 MSI1O43347 362 aaKnown RBP7.88□□□□□ -1.15
CCDC93-207ENST00000474006 LRCH4O75427 683 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 FTCDO95954 541 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 IGLV3-25P01717 112 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 MBL2P11226 248 aaPredicted RBP7.88□□□□□ -1.15
CCDC93-207ENST00000474006 TNNT1P13805 278 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 TCF4P15884 667 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 DESP17661 470 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 CEBPBP17676 345 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 PFKLP17858 780 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 KCNA5P22460 613 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 DDX6P26196 483 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC93-207ENST00000474006 MIPP30301 263 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 MAN1A1P33908 653 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 RDXP35241 583 aaKnown RBP7.88□□□□□ -1.15
CCDC93-207ENST00000474006 PCK1P35558 622 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 MTHFRP42898 656 aa7.88□□□□□ -1.15
CCDC93-207ENST00000474006 SSR1P43307 286 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms